Sequence 1: | NP_001171532.1 | Gene: | SEMA6C / 10500 | HGNCID: | 10740 | Length: | 962 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
Alignment Length: | 585 | Identity: | 193/585 - (32%) |
---|---|---|---|
Similarity: | 295/585 - (50%) | Gaps: | 103/585 - (17%) |
- Green bases have known domain annotations that are detailed below.
Human 9 PLLLLLLLL--SLPHTQAAFPQD-----PLPLLISDLQGTSPLSWFRGLEDDAVAAELGLDFQRF 66
Human 67 LTLNR---TLLVAARDHVFSFDLQ------AEEEGEGLVPNKYLTWRSQDVENCAVRGK-LTDEC 121
Human 122 YNYIRVLVPWD-SQTLLACGTNSFSPVCRSY----GITSLQQEGEELS---GQARCPFDATQSNV 178
Human 179 AIFAEG-------SLYSATAADFQASDAVVYRSLGPQPPL-------------RSAKYDSKWLRE 223
Human 224 PHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCS 288
Human 289 VPGDSTFYFDVLQALTG-PVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRS 352
Human 353 LDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLLDPAV-----PPVTHQ 412
Human 413 PLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLT--PGGRSGGPEPILLEEIDAYS 475
Human 476 PARCSGKRTAQTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRC-ARHGACQRSCLASQDPYCGW 539
Human 540 539 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SEMA6C | NP_001171532.1 | Sema | 53..517 | CDD:301699 | 166/509 (33%) |
PSI | 518..570 | CDD:279745 | 11/23 (48%) | ||
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 165/500 (33%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |