DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB13 and zen

DIOPT Version :10

Sequence 1:NP_006352.2 Gene:HOXB13 / 10481 HGNCID:5112 Length:284 Species:Homo sapiens
Sequence 2:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster


Alignment Length:177 Identity:47/177 - (26%)
Similarity:66/177 - (37%) Gaps:49/177 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   109 YPAETPTAGEEYPSRPTEFAFYP------------GYPGTYQPMASYLDVSVVQTLGAPGEPRHD 161
            ||......| .|.:.|:|..:..            |.|..|..|.|.     ..||.....|:|.
  Fly     8 YPVHQAKVG-SYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNSN-----PTTLNDHCSPQHV 66

Human   162 SLLPVDSYQSWALAGGWNSQMCCQGEQNPPGPFWKAAFADSSGQHPPDACAFRRGRKKRIPYSKG 226
            ....|.|                  ::|.|          |...|.......:|   .|..::..
  Fly    67 HQQHVSS------------------DENLP----------SQPNHDSQRVKLKR---SRTAFTSV 100

Human   227 QLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 273
            ||.|||.|:.:|.::.:.:|.:|:...||.|||:.|||||||:|.||
  Fly   101 QLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB13NP_006352.2 HoxA13_N 12..123 CDD:463521 4/13 (31%)
Homeodomain 217..273 CDD:459649 23/55 (42%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:28473536, ECO:0000305|Ref.8 217..246 8/28 (29%)
Interaction with 5-mCpG DNA. /evidence=ECO:0000305|PubMed:28473536 258..269 8/10 (80%)
Interaction with DNA. /evidence=ECO:0000305|PubMed:28473536, ECO:0000305|Ref.8 270..273 1/2 (50%)
zenNP_476793.1 Homeodomain 91..147 CDD:459649 24/58 (41%)

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