DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FST and Fs

DIOPT Version :9

Sequence 1:XP_005248457.1 Gene:FST / 10468 HGNCID:3971 Length:357 Species:Homo sapiens
Sequence 2:NP_652376.2 Gene:Fs / 2768836 FlyBaseID:FBgn0259878 Length:767 Species:Drosophila melanogaster


Alignment Length:600 Identity:134/600 - (22%)
Similarity:180/600 - (30%) Gaps:295/600 - (49%)


- Green bases have known domain annotations that are detailed below.


Human     6 HQPGG---LCLLL-LLLCQFMEDRSAQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWT 66
            ||.||   :.||: |||..|   |.|.||.||.....:|:|..::.|::|:.|||.:.: |.|:|
  Fly   187 HQLGGQPLMALLIGLLLLNF---RLAAAGTCWQTHLGSGKCGQVFSTDISRSECCGSSQ-SFSYT 247

Human    67 EEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDC--------- 122
            :.:::....| :....||...|.||.|:|:...|||.||| :.:|.:|:|||||:|         
  Fly   248 DRELSSVEYF-FATAIGGGVECSPCMESCKGFKCGPNKKC-VKRKGRPKCVCAPECGAALRRRTH 310

Human   123 ----------------------------------------------------------------- 122
                                                                             
  Fly   311 QQELELEQEPELEEEQQEMKPPRESRSLSSENTNFNLGLDGGQRQRADNQRKLQPRESKHRRLLI 375

Human   123 ----------------------------------------------------------------- 122
                                                                             
  Fly   376 IDSSSRSSSNLPDQPTSGRRGRVEMTGYERRRHRNNHGKHLTRSMTTGANDSFPADKTPAQSPAA 440

Human   123 ----------------------------------------------------------------- 122
                                                                             
  Fly   441 DSILAQSRLANLANANEPANDINRQSSTRVRHQHARRIEHAPNPDNGLRKRQHKQQQQHQHQHQD 505

Human   123 --------SNITWKG------------------------------------------------PV 131
                    :|.|..|                                                ||
  Fly   506 RMNTEAQSANTTVSGSGSGATNHRRISQLQHGSETAASSDLANTHDLAHLGGIYAPLPPQHSNPV 570

Human   132 CGLDGKTYRNECALLKARCK-EQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI 195
            ||.||:||..||.|.|..|: ...:|||.|:|.||.:|..|.|....|||.||....:|:.|...
  Fly   571 CGTDGRTYNTECQLRKRACRTNNAQLEVAYRGHCKNSCSGVHCLNGLTCVEDQYLMPHCIACRIE 635

Human   196 CP----EPASS----EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCISRYSGLRKEKEK 252
            ||    :..||    .|.:||.||.||.|||.:.:..|.:||||.:||.|.|            :
  Fly   636 CPWDNLDVDSSGYDERQAVCGVDGKTYRSACDINRMICKIGRSIAVAYPGPC------------R 688

Human   253 TEAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPV---CASDNATYASECAMKEAA 314
            ....||.||:|.....||.|.:..:.||..|...|| .|...||   |..:|.||.|.|.|.:.:
  Fly   689 AGRVSCADIKCGPKDNCLVDLQTRQPRCVTCRYKCP-RKQQRPVHKICGYNNQTYNSWCEMHKHS 752

Human   315 CSSGVLLEVKHSGSC 329
            |.|...:.||..|||
  Fly   753 CESRYFIGVKSQGSC 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FSTXP_005248457.1 FOLN 94..117 CDD:128570 9/22 (41%)
KAZAL 117..164 CDD:197624 26/307 (8%)
FOLN 167..190 CDD:128570 8/22 (36%)
KAZAL 192..239 CDD:197624 23/54 (43%)
KAZAL 283..329 CDD:197624 18/48 (38%)
FsNP_652376.2 KAZAL 564..604 CDD:197624 18/39 (46%)
KAZAL_FS 654..687 CDD:238052 17/32 (53%)
KAZAL_FS 723..767 CDD:238052 17/44 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I12130
eggNOG 1 0.900 - - E1_KOG3649
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6413
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1460520at2759
OrthoFinder 1 1.000 - - FOG0003390
OrthoInspector 1 1.000 - - otm42275
orthoMCL 1 0.900 - - OOG6_107565
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5159
SonicParanoid 1 1.000 - - X2287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.660

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