DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TACC3 and Rok

DIOPT Version :9

Sequence 1:XP_005247986.1 Gene:TACC3 / 10460 HGNCID:11524 Length:842 Species:Homo sapiens
Sequence 2:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster


Alignment Length:607 Identity:123/607 - (20%)
Similarity:200/607 - (32%) Gaps:221/607 - (36%)


- Green bases have known domain annotations that are detailed below.


Human   365 PPLRKAAVRQQKAPQEVEEDDGRS----GAGEDP----PMPASRGSYHLDWDKMDDPNFIPFGGD 421
            ||:         .|:...:||.|:    ...|.|    |:|           |..|.|.:||.|.
  Fly   364 PPV---------VPELSSDDDTRNFEDIERDEKPEEVFPVP-----------KGFDGNHLPFIGF 408

Human   422 TKSG-----CSEAQPPESPETRLGQPAAEQLHAGPATEEPGPCLSQQLHSASAEDTPVVQLAAET 481
            |.:|     .|:....||.|       |...::|.|:...|       |..:....|        
  Fly   409 TYTGDYQLLSSDTVDAESKE-------ANVANSGAASNNHG-------HGHNHRHRP-------- 451

Human   482 PTAESKERALNSASTSLPTSCPGSEPVPTHQQGQPALELKEESFRDPAEVLGTGAEVDYLEQFGT 546
                |....|......|......||          |||.::...|...|:: |..|.: |::..:
  Fly   452 ----SNSNELKRLEALLERERGRSE----------ALEQQDAGLRQQIELI-TKREAE-LQRIAS 500

Human   547 SSFKESALRKQSLYLKFDPLLRDSPGRPVPVATETSSMHGANETPSGRPR-----------EAKL 600
            ...|:.|||:.:..:....:.::...|....|....:..........|.|           |.:|
  Fly   501 EYEKDLALRQHNYKVAMQKVEQEIELRKKTEALLVETQRNLENEQKTRARDLNINDKVVSLEKQL 565

Human   601 VEFD---------------FLGALDIPVPGPPPGVPAPGGPPLSTGPIVDLLQYSQK-------- 642
            :|.:               ....||..|......|          ..:||::...||        
  Fly   566 LEMEQSYKTETENTQKLKKHNAELDFTVKSQEEKV----------RDMVDMIDTLQKHKEELGQE 620

Human   643 --DLDAVV------RTQVK-------------------------ATQEENRELRSRCEELH---- 670
              :|.|:|      |:|:|                         ..||:||.|..:..:|.    
  Fly   621 NAELQALVVQEKNLRSQLKEMHKEAENKMQTLINDIERTMCREQKAQEDNRALLEKISDLEKAHA 685

Human   671 GKNLELGKIMDRFEEVVYQAMEEVQKQKELSKAE--------IQKVLKEKD--QLTTDLNSMEKS 725
            |.:.||.....|:::.| :|.:|.:|.:.:|:.|        :|..|.|:.  ::..|.:|.|| 
  Fly   686 GLDFELKAAQGRYQQEV-KAHQETEKSRLVSREEANLQEVKALQSKLNEEKSARIKADQHSQEK- 748

Human   726 FSDLFKRFEKQKEVIE-GYRKNEESLKKCVEDYLARITQEGQRYQALKAHAEE----------KL 779
                    |:|..::. .||:.:..|:|..    ....||.::..||::..::          :|
  Fly   749 --------ERQLSMLSVDYRQIQLRLQKLE----GECRQESEKVAALQSQLDQEHSKRNALLSEL 801

Human   780 QLANEEIAQVRSK---------------------------AQAEALA----LQASLRKEQMRIQS 813
            .|.:.|:|.:||:                           ...||||    |||.|..||. ...
  Fly   802 SLHSSEVAHLRSRENQLQKELSTQREAKRRFEEDLTQLKSTHHEALANNRELQAQLEAEQC-FSR 865

Human   814 LEKTVEQKTKEN--EELTRICD 833
            |.||...:.:|.  |.|::|.|
  Fly   866 LYKTQANENREESAERLSKIED 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TACC3XP_005247986.1 TACC 639..836 CDD:282818 65/294 (22%)
iSH2_PI3K_IA_R 656..>757 CDD:304922 29/115 (25%)
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 17/66 (26%)
S_TKc 87..349 CDD:214567
SbcC 484..1088 CDD:223496 86/431 (20%)
Rho_Binding 963..1027 CDD:286056
PH_ROCK 1134..1250 CDD:269948
C1 1254..1307 CDD:197519
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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