Sequence 1: | NP_006329.2 | Gene: | LRRN2 / 10446 | HGNCID: | 16914 | Length: | 713 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001303391.1 | Gene: | caps / 39493 | FlyBaseID: | FBgn0023095 | Length: | 811 | Species: | Drosophila melanogaster |
Alignment Length: | 680 | Identity: | 172/680 - (25%) |
---|---|---|---|
Similarity: | 276/680 - (40%) | Gaps: | 136/680 - (20%) |
- Green bases have known domain annotations that are detailed below.
Human 18 AAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQSNSIV 82
Human 83 RVDQSELGYLANLTELDLSQNSFSD-----ARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLAS 142
Human 143 ------------------------LQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSR 183
Human 184 -WFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDN 247
Human 248 QLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPEL 312
Human 313 TKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVI 377
Human 378 RW-------ANATGTRVRFIEPQSTLCAEPPDLQRLPVREVPFREMTDHCLPLISPRSFPPSLQV 435
Human 436 ASGESMVLHCRALAEPEPEIYWVTPAGLR-LTPAHA--GRRYRVYPEGTLELRRVTAEE------ 491
Human 492 ---------AGLYTCVAQNLVGADTKTVSVVVGRALLQP-----GRDEGQGLELRVQETHPYHIL 542
Human 543 LSWVTPPNTVSTNLTWSSASSLRGQGATALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQ 607
Human 608 -----LACVWARTKEATSCHRALGDRPGLI 632 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRRN2 | NP_006329.2 | leucine-rich repeat | 51..69 | CDD:275380 | 6/17 (35%) |
LRR_RI | 62..288 | CDD:238064 | 77/255 (30%) | ||
LRR 1 | 70..91 | 5/20 (25%) | |||
leucine-rich repeat | 71..94 | CDD:275380 | 5/22 (23%) | ||
LRR 2 | 94..115 | 9/25 (36%) | |||
leucine-rich repeat | 95..118 | CDD:275380 | 11/27 (41%) | ||
LRR_8 | 117..177 | CDD:290566 | 23/83 (28%) | ||
LRR 3 | 118..139 | 6/20 (30%) | |||
leucine-rich repeat | 119..142 | CDD:275380 | 8/22 (36%) | ||
LRR 4 | 142..163 | 8/44 (18%) | |||
leucine-rich repeat | 143..166 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 165..222 | CDD:290566 | 18/57 (32%) | ||
LRR 5 | 166..187 | 7/21 (33%) | |||
leucine-rich repeat | 167..190 | CDD:275380 | 7/23 (30%) | ||
LRR 6 | 190..211 | 6/20 (30%) | |||
leucine-rich repeat | 191..214 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | 209..>372 | CDD:238064 | 50/162 (31%) | ||
LRR_8 | 214..273 | CDD:290566 | 22/58 (38%) | ||
LRR 7 | 214..235 | 9/20 (45%) | |||
leucine-rich repeat | 215..238 | CDD:275380 | 11/22 (50%) | ||
LRR 8 | 238..259 | 8/20 (40%) | |||
leucine-rich repeat | 239..262 | CDD:275380 | 7/22 (32%) | ||
LRR 9 | 262..283 | 5/20 (25%) | |||
leucine-rich repeat | 263..286 | CDD:275380 | 5/22 (23%) | ||
LRR 10 | 286..305 | 4/18 (22%) | |||
leucine-rich repeat | 287..311 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 310..371 | CDD:290566 | 18/60 (30%) | ||
LRR 11 | 311..333 | 5/21 (24%) | |||
leucine-rich repeat | 312..334 | CDD:275380 | 5/21 (24%) | ||
LRR 12 | 336..357 | 7/20 (35%) | |||
leucine-rich repeat | 337..360 | CDD:275378 | 7/22 (32%) | ||
leucine-rich repeat | 361..373 | CDD:275378 | 5/11 (45%) | ||
TPKR_C2 | 369..412 | CDD:301599 | 14/49 (29%) | ||
I-set | 430..514 | CDD:254352 | 21/101 (21%) | ||
Ig | 438..514 | CDD:299845 | 19/93 (20%) | ||
caps | NP_001303391.1 | leucine-rich repeat | 75..96 | CDD:275380 | 5/21 (24%) |
LRR_8 | 96..155 | CDD:290566 | 19/63 (30%) | ||
leucine-rich repeat | 97..120 | CDD:275380 | 11/27 (41%) | ||
leucine-rich repeat | 121..144 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 143..201 | CDD:290566 | 14/57 (25%) | ||
leucine-rich repeat | 145..168 | CDD:275380 | 0/22 (0%) | ||
LRR_RI | 147..397 | CDD:238064 | 72/250 (29%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 193..217 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 217..276 | CDD:290566 | 23/58 (40%) | ||
leucine-rich repeat | 218..241 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 242..265 | CDD:275380 | 11/22 (50%) | ||
LRR_8 | 265..321 | CDD:290566 | 16/55 (29%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 312..374 | CDD:290566 | 15/61 (25%) | ||
leucine-rich repeat | 314..335 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 339..363 | CDD:275380 | 6/23 (26%) | ||
LRRCT | 395..445 | CDD:214507 | 17/63 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H21274 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8524 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103993 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5661 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.840 |