back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment MYL12B and Mlc-c

DIOPT Version :10

Sequence 1:	NP_291024.1	Gene:	MYL12B / 103910	HGNCID:	29827	Length:	172	Species:	Homo sapiens
Sequence 2:	NP_001245533.1	Gene:	Mlc-c / 31474	FlyBaseID:	FBgn0004687	Length:	153	Species:	Drosophila melanogaster

Alignment Length:	152	Identity:	53/152 - (34%)
Similarity:	85/152 - (55%)	Gaps:	7/152 - (4%)

- Green bases have known domain annotations that are detailed below.

Human    19 TSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPGP--I 81
            |::|...|  :.::||:||||:.|...||.|....:.:.|.:||:|||::.:....::....  |
  Fly     5 TAHVKQTF--TTLEEFQEAFNLFDNRGDGKIQLSQVGECLRALGQNPTESDVKKCTHQLKPDERI 67

Human    82 NFTMFLTMFG--EKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYR 144
            :|.:||.::.  .|....|..|........||::|:|.|....||.||||:|::.|||||::|..
  Fly    68 SFEVFLPIYQAISKARSGDTADDFIEGLRHFDKDASGYISSAELRHLLTTLGEKLTDEEVEQLLA 132

Human   145 EAPIDKKGNFNYIEFTRILKHG 166
            ... |::||.||.||.|::..|
  Fly   133 NME-DQQGNINYEEFVRMVMSG 153

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.