DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TUBB4A and betaTub97EF

DIOPT Version :9

Sequence 1:NP_001276052.1 Gene:TUBB4A / 10382 HGNCID:20774 Length:495 Species:Homo sapiens
Sequence 2:NP_001163753.1 Gene:betaTub97EF / 43359 FlyBaseID:FBgn0003890 Length:457 Species:Drosophila melanogaster


Alignment Length:444 Identity:390/444 - (87%)
Similarity:422/444 - (95%) Gaps:2/444 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    52 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVL 116
            |||||||||||||||||:||||:|||||||||.|.|||:|.||.|||:||||||:.|.|||||||
  Fly     1 MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVL 65

Human   117 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCL 181
            :|||||||||||..|.||:|||||||:||||||||||||||||||||:|:||:|:|||:|.||||
  Fly    66 IDLEPGTMDSVRQSPVGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELIDSVLEVLRKESEGCDCL 130

Human   182 QGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVEN 246
            |||||.||||||||||:|||||||||||:||||||:||||||||||||||||||||||:||||||
  Fly   131 QGFQLAHSLGGGTGSGLGTLLISKIREEYPDRIMNSFSVVPSPKVSDTVVEPYNATLSIHQLVEN 195

Human   247 TDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPF 311
            ||||:|||||||||||||||||::|||||||||||.|||||||||||||||||||||||||||||
  Fly   196 TDETFCIDNEALYDICFRTLKLSSPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPF 260

Human   312 PRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKE 376
            ||||||||||||||::||||||||||.|||||||||||||.|||||||||||||.:|||.|||||
  Fly   261 PRLHFFMPGFAPLTAKGSQQYRALTVAELTQQMFDAKNMMTACDPRHGRYLTVACIFRGPMSMKE 325

Human   377 VDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR 441
            ||.||.:||||||||||||||||||.||||||||||||:||||||||||||:|||||||||||||
  Fly   326 VDTQMYNVQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFR 390

Human   442 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA-EEGEF-EEEAEEE 493
            ||||||||||||||||||||||||||||:|||||||:||| :|.|| :|:||:|
  Fly   391 RKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDEQAEQE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUBB4ANP_001276052.1 PLN00220 52..478 CDD:215107 379/425 (89%)
beta_tubulin 53..477 CDD:276956 377/423 (89%)
betaTub97EFNP_001163753.1 PLN00220 1..444 CDD:215107 389/442 (88%)
beta_tubulin 2..426 CDD:276956 377/423 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.930

Return to query results.
Submit another query.