DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pnpo and CG31473

DIOPT Version :9

Sequence 1:NP_598782.1 Gene:Pnpo / 103711 MGIID:2144151 Length:261 Species:Mus musculus
Sequence 2:NP_731188.1 Gene:CG31473 / 318753 FlyBaseID:FBgn0051473 Length:257 Species:Drosophila melanogaster


Alignment Length:231 Identity:70/231 - (30%)
Similarity:105/231 - (45%) Gaps:35/231 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse    44 DREAFEETHLTSLDPMKQFASWFDEA-VQCPDIGEANAMCVATCTRDGKPSARMLLLKGFGKDGF 107
            ::..:||.|:.       |.:|...| .:.|.: .....|:||..:.|:|..|:..::.....|.
  Fly    40 EQRVYEEPHVI-------FQNWLMAAQKEAPQV-RPRLACMATVDKSGEPVTRLTSIEEVNSHGI 96

Mouse   108 RFFTNYESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEKEAENYFHSRPKSSQIG---- 168
            .|||...||:..|:.:||..||.|.|.||.|.||:.|...:|.|::..:.|...|:..|:.    
  Fly    97 TFFTTLGSRQAGEISANPHVSLHFNWAPLMRSVRIAGSAHQLTEEQVRDQFRRFPRHVQMSITHG 161

Mouse   169 ---AVVSRQSSVIPDREYLRKKNEELGQLYQDQEVPKPEYWGGYILYPQVMEFWQ------GQTN 224
               |....||.........::.|..||:  |.:|:|.|..||||||.|.:.||..      |:| 
  Fly   162 PRYAAAEWQSRSGFFARIGQRLNTWLGK--QPEEIPMPHNWGGYILTPSLYEFGMLSGEKAGRT- 223

Mouse   225 RLHDRIVFRRGLATGDSPLGPMTHHGE---EDWVYE 257
                |:.|||.|   :.|.|....|.:   :||||:
  Fly   224 ----RVRFRRCL---EMPRGTRVGHVQAERQDWVYD 252

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity