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Protein Alignment HMG20B and Dsp1
DIOPT Version :9
Sequence 1: | NP_006330.2 |
Gene: | HMG20B / 10362 |
HGNCID: | 5002 |
Length: | 317 |
Species: | Homo sapiens |
Sequence 2: | NP_001138203.1 |
Gene: | Dsp1 / 117294 |
FlyBaseID: | FBgn0278608 |
Length: | 397 |
Species: | Drosophila melanogaster |
Alignment Length: | 152 |
Identity: | 45/152 - (29%) |
Similarity: | 73/152 - (48%) |
Gaps: | 15/152 - (9%) |
- Green bases have known domain annotations that are detailed below.
Human 42 EKGSHEEE-----PVKKRGWPKGKKRKKIL-PNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEI 100
:|..:|.| |.|.....:|||||:|. ||.||..::.:..|.|:.|.:::..:|:....:|
Fly 241 DKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDI 305
Human 101 TKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSSSGLM 165
.|.||.:||.:.|..||:|...|||:|.:|.:|:..|:.|....|....:| ..::.:...:.|:
Fly 306 AKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQ-ASMQAQAQKAALL 369
Human 166 --------NTLLNGHKGGDCDG 179
..|...|...|.||
Fly 370 AAAAQQQHQQLEEQHDDDDGDG 391
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3288 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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