DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SMYD5 and Smyd3

DIOPT Version :9

Sequence 1:NP_006053.2 Gene:SMYD5 / 10322 HGNCID:16258 Length:418 Species:Homo sapiens
Sequence 2:NP_524768.2 Gene:Smyd3 / 44554 FlyBaseID:FBgn0011566 Length:468 Species:Drosophila melanogaster


Alignment Length:402 Identity:97/402 - (24%)
Similarity:149/402 - (37%) Gaps:133/402 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    13 VGVAGRARVSVEVRFVSSAKGKGLF--ATQLIRKGETIFVERPLVAAQFLWNALYRYRACDHCLR 75
            ||.:..|..|......|| |.|.|.  |.| |::|:.|..|:|..   |:..:.||...||:||.
  Fly     6 VGSSRSATTSATASACSS-KSKNLKNPAPQ-IKRGQRILTEKPFA---FVLKSQYRLERCDNCLE 65

Human    76 ALEKAEENAQRLTGKPGQVLPHPELCTVRKDLHQNCPHCQ-VMYCSAECRLAATEQYHQVLCPGP 139
            |.               :||              .|.:|: |.||...|::.|..| |:..||..
  Fly    66 AT---------------KVL--------------KCSNCRYVSYCHRSCQMQAWGQ-HKHECPFL 100

Human   140 SQDDPLHPLNKLQEAWRSIHYPPETASIMLMARMVATVKQAKD------KDRWIRLFSQFCNKTA 198
            .:   :||           ...|:.|  .::.|::..::...|      .:...|.|....:..|
  Fly   101 KK---VHP-----------RVVPDAA--RMLCRLILRLEHGGDLIRGYYTEHGSRKFRDLMSHYA 149

Human   199 ---NEEEEIVHKLLGDKFKGQLELLRRLFTEALYEEAVSQWFTPD--GFRSLFALVGTNGQGIGT 258
               |:...:.|          |:.|..:.|:.:.|   |....|:  ...|::..:.|||..|  
  Fly   150 EIKNDPMRLEH----------LDSLHAVLTDMMAE---SPSTVPNKTELMSIYGRLITNGFNI-- 199

Human   259 SSLSQWVHACDTLELKPQDREQLDAFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAE 323
                                  |||.::.:      ||..:|..         |..:|||.|||.
  Fly   200 ----------------------LDAEMNSI------ATAIYLGV---------SITDHSCQPNAV 227

Human   324 TSFPENNFLLHVTALEDIK--PGEEICISYLDCCQRERSRHSRHKILRENYLFVCSCPKCLAEAD 386
            .:|..|.  |||.|:||::  ...:|.|||:|..   .:...|...|:|:|.|:|.|.||     
  Fly   228 ATFEGNE--LHVHAIEDMECLDWSKIFISYIDLL---NTPEQRRLDLKEHYYFLCVCSKC----- 282

Human   387 EPNVTSEEEEEE 398
                |..:|.:|
  Fly   283 ----TDAKESKE 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMYD5NP_006053.2 SET <298..351 CDD:214614 18/54 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..418 3/14 (21%)
Smyd3NP_524768.2 zf-MYND 60..97 CDD:280009 16/66 (24%)
TPR_12 377..440 CDD:290160
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.