| Sequence 1: | XP_011516423.1 | Gene: | LAMC3 / 10319 | HGNCID: | 6494 | Length: | 1581 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001285243.1 | Gene: | NetA / 32398 | FlyBaseID: | FBgn0015773 | Length: | 726 | Species: | Drosophila melanogaster |
| Alignment Length: | 764 | Identity: | 239/764 - (31%) |
|---|---|---|---|
| Similarity: | 328/764 - (42%) | Gaps: | 205/764 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Human 25 CYDGAGRPQRCLPVFENAAFGRLAQASHTCGSP-PEDFCPHVGAAGAGAHCQRCDAADPQRHHNA 88
Human 89 SYLTDFHSQDESTWWQS-PSMAFGVQYPTSVNITLRLGKAYEITYVRLKF--HTSRPESFAIYKR 150
Human 151 SRADGPWEPYQFYSASCQKTYGRPEGQYL-RPGEDERVAFCTSEFSDISPLSGGNVAFSTLEGRP 214
Human 215 SAYNFEESPGLQEWVTSTELLISLDRLNTFGDDIFKDPKVLQS---------------------- 257
Human 258 -------------------YYYAVSDFSVGGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCER 303
Human 304 CLPFFQDRPWARGTAEAAHECLPCNCSGRSEECTFDRELFR-STG-HGGRCHHCRDHTAGPHCER 366
Human 367 CQENFYHWDPRMP------CQPCDCQSAGSLHLQCDDT-GTCACKPTVTGWKCDRCLPGFHSLSE 424
Human 425 GGCRPCTCNPAGSLDTCD--------------PRSG-----------RCPCKENVEGNLCDRCRP 464
Human 465 GTFNLQPHNPAGCSSCFCYGHSKVCASTAQFQVHHILSDFHQGAEGWWARSVG---GSEHPPQWS 526
Human 527 PNGVLLSPEDEEELTAPEKFLGDQRFSYGQPLILTFRVPPGDSPLPVQLRLEGTGLALSLRHSSL 591
Human 592 SGPQDAGHPREVEL-RFHLQETSEDVAPPLPPFHFQRLLANLTSLRLRVSPGPSP-AGPVFLTEV 654
Human 655 RLTSARPGLSPPASWV----EI-CSCP-----TGY--TGQFCESCAPGY 691 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LAMC3 | XP_011516423.1 | Laminin_N | 44..269 | CDD:278484 | 88/270 (33%) |
| EGF_Lam | 270..317 | CDD:238012 | 33/46 (72%) | ||
| Laminin_EGF | 327..383 | CDD:278482 | 25/63 (40%) | ||
| EGF_Lam | 382..428 | CDD:238012 | 19/46 (41%) | ||
| Laminin_EGF | 430..477 | CDD:278482 | 12/71 (17%) | ||
| Laminin_B | 541..662 | CDD:278481 | 24/122 (20%) | ||
| EGF_Lam | 706..753 | CDD:238012 | |||
| EGF_Lam | 754..802 | CDD:238012 | |||
| Laminin_EGF | 810..857 | CDD:278482 | |||
| EGF_Lam | 865..915 | CDD:238012 | |||
| Laminin_EGF | 917..965 | CDD:278482 | |||
| EGF_Lam | 964..1011 | CDD:238012 | |||
| PspA_IM30 | 1191..1426 | CDD:281941 | |||
| ATP-synt_B | <1360..1453 | CDD:304375 | |||
| NetA | NP_001285243.1 | LamNT | 44..280 | CDD:214532 | 89/254 (35%) |
| EGF_Lam | 312..357 | CDD:238012 | 31/44 (70%) | ||
| EGF_Lam | 369..426 | CDD:238012 | 24/57 (42%) | ||
| EGF_Lam | 431..479 | CDD:238012 | 19/48 (40%) | ||
| NTR_netrin-1_like | 545..723 | CDD:239634 | 44/208 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.870 | |||||