DRSC/TRiP Functional Genomics Resources

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Protein Alignment VPS26C and CG4074

DIOPT Version :10

Sequence 1:NP_006043.1 Gene:VPS26C / 10311 HGNCID:3044 Length:297 Species:Homo sapiens
Sequence 2:NP_649249.2 Gene:CG4074 / 40290 FlyBaseID:FBgn0037017 Length:316 Species:Drosophila melanogaster


Alignment Length:303 Identity:151/303 - (49%)
Similarity:212/303 - (69%) Gaps:19/303 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     6 DIKIKRANKVYHAGEVLSGVVVISSKDSVQHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQ 70
            |||:||.|||||..::|.|.|........:|:|:.|.:||.||||||||:||:|:|||||||||.
  Fly     7 DIKLKRENKVYHENDMLLGCVQFQCAQETKHEGIILYLEGIVNLQLSAKTVGLFDAFYNSVKPIN 71

Human    71 IINSTIEMVKPGKFPSGKTEIPFEFPLHLKGN-KVLYETYHGVFVNIQYTLRCDMKRSLLAKDLT 134
            ::.:::|:..|||..:|::|..||.||..|.. ::|||||||||:|:.|.|.|.:||:.|.|..|
  Fly    72 LLQNSLELSAPGKLSAGRSEFHFELPLVCKKEPRILYETYHGVFINVNYQLTCTVKRNFLGKATT 136

Human   135 KTCEFIVHSAPQKGKFTPSP--------VDFTITPETLQ---NVKERALLPKFLLRGHLNSTNCV 188
            |..:|.|       ::.|.|        |.|:::|::||   :.|||..:|:||:.|.|:.:...
  Fly   137 KIQQFCV-------QYKPVPLSEDSKKVVPFSLSPDSLQKNASAKERLSMPRFLITGRLDRSEFC 194

Human   189 ITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMV 253
            :|.|:||.:.|:.:||||:|:|:||||||||||.|||::||||||.||||||:|...|.:||:||
  Fly   195 VTTPITGSITVQHTEAAIKSIEMQLVRVETCGCDEGYSKDATEIQTIQIADGNVLPKLELPIHMV 259

Human   254 FPRLFTCPTLETTNFKVEFEVNIVVLLHPDHLITENFPLKLCR 296
            .|||||||||.|.|||:|||:|::|:...|:.::|||.:.|.|
  Fly   260 LPRLFTCPTLLTKNFKIEFELNLIVVFKEDYTVSENFKIVLKR 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VPS26CNP_006043.1 Arrestin_N 1..283 CDD:451447 145/288 (50%)
CG4074NP_649249.2 Arrestin_N 6..289 CDD:451447 145/288 (50%)

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