DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAK4 and pak-2

DIOPT Version :10

Sequence 1:NP_005875.1 Gene:PAK4 / 10298 HGNCID:16059 Length:591 Species:Homo sapiens
Sequence 2:NP_505809.2 Gene:pak-2 / 179527 WormBaseID:WBGene00006443 Length:522 Species:Caenorhabditis elegans


Alignment Length:602 Identity:253/602 - (42%)
Similarity:322/602 - (53%) Gaps:131/602 - (21%)


- Green bases have known domain annotations that are detailed below.


Human     4 KRKKRVEISAPSNFEHRVHTGFDQHEQKFTGLPRQWQSLI--EESARRPKPLVDPACITSIQPGA 66
            ::.|:.|||.|||||||:|.|||.....:||||:|||:|:  ..|..||||:|||:|||.:....
 Worm     9 RKVKKSEISTPSNFEHRIHAGFDARSGTYTGLPKQWQALLGPPRSISRPKPMVDPSCITPVDVAE 73

Human    67 PKTIVRGSKGAKDGALTLLLDEFENMSVTRSNSLRRDSPPPPARARQENGMPEEPATTARGGPGK 131
            .||::||.                      |:|.|.:||.|       .||...|..:.    .:
 Worm    74 LKTVIRGP----------------------SSSFRYNSPLP-------FGMTNSPMPSV----AR 105

Human   132 AGSRGRFAGHSEAGGGSGDRRRAGPEKRPKSSREGSGGPQESSRDKRPLSGPDVGTPQPAGLASG 196
            :.|....|..|.....|..|....|...|.|.|                                
 Worm   106 SNSLRISATASPVVNVSSARHSFRPTLPPVSQR-------------------------------- 138

Human   197 AKLAAGRPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGV 261
                 |.||                        |.||...|.:     .:.:||.    :.:.||
 Worm   139 -----GYPF------------------------NDPSYAPLPL-----RNQKPPM----STTFGV 165

Human   262 LGPH-------------ASEPQLAPPACTPAAPAVPGPPGPRSPQREP---QRVSHEQFRAALQL 310
            ..||             .:.|||.|.:          |..|::.:::|   :.||.|:||.||:.
 Worm   166 EKPHQYQQIITIVAPSRTTTPQLQPKS----------PSTPQAMRQQPKCTEGVSDEEFRNALKF 220

Human   311 VVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 375
            |||..||||.|.::.:|||||||:|..|...|:.::||||:|:||||||||||||||.|:|.|||
 Worm   221 VVDGTDPRSDLTDYKQIGEGSTGVVEAAYKISTKQIVAVKRMNLRKQQRRELLFNEVSILRQYQH 285

Human   376 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 440
            .|:|..::|:||.|||||||||:|||:||||||.|||.|.|||.:...||.||..|||:.|||||
 Worm   286 PNIVRFFSSHLVDDELWVVMEFMEGGSLTDIVTATRMTEPQIATISRQVLGALDFLHARKVIHRD 350

Human   441 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 505
            ||||||||..||.|||:|||||.|:|:|||||:||||||||.|.|:|:|.||....||||.|||:
 Worm   351 IKSDSILLKRDGTVKLTDFGFCGQLSEEVPRRRSLVGTPYWTAAEVIAREPYDTRADIWSFGIML 415

Human   506 IEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 570
            ||||:||||:||:.|.:|||.|||....|.....|||..|...|...:|:|..:|..|.:||:||
 Worm   416 IEMVEGEPPFFNDQPFQAMKRIRDEHEARFSRHAKVSVELSELLSHCIVKDVNKRWPAKDLLRHP 480

Human   571 FLAKAGPPASIVPLMRQ 587
            |.|||...:||.||:.|
 Worm   481 FFAKAQHSSSIAPLLLQ 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAK4NP_005875.1 CRIB_PAK_like 10..55 CDD:238526 27/46 (59%)
Linker 25..320 76/312 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..301 39/221 (18%)
GEF-interaction domain (GID) 298..323 15/24 (63%)
STKc_PAK4 300..591 CDD:132988 176/288 (61%)
pak-2NP_505809.2 CRIB_PAK_like 14..60 CDD:238526 26/45 (58%)
Protein Kinases, catalytic domain 223..483 CDD:473864 160/259 (62%)

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