DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAK4 and pak4

DIOPT Version :10

Sequence 1:NP_005875.1 Gene:PAK4 / 10298 HGNCID:16059 Length:591 Species:Homo sapiens
Sequence 2:XP_012823244.1 Gene:pak4 / 100036644 XenbaseID:XB-GENE-1013749 Length:665 Species:Xenopus tropicalis


Alignment Length:661 Identity:444/661 - (67%)
Similarity:480/661 - (72%) Gaps:81/661 - (12%)


- Green bases have known domain annotations that are detailed below.


Human     1 MFGKRKKRVEISAPSNFEHRVHTGFDQHEQKFTGLPRQWQSLIEESARRPKPLVDPACITSIQPG 65
            ||||:|||:|||||.||||||||||||.|||||||||||||||||||:||||||||:.||:|...
 Frog    16 MFGKKKKRIEISAPLNFEHRVHTGFDQQEQKFTGLPRQWQSLIEESAKRPKPLVDPSYITTINHV 80

Human    66 APKTIVRGSKGAKDGALTLLLDEFENMSVTRSNSLRRDSP---PPPARARQENGMPE-------- 119
            ..||||||||.:.||:|..|||||:.||:.|||||||:||   |...|..|||||.|        
 Frog    81 PQKTIVRGSKMSLDGSLAWLLDEFDAMSICRSNSLRRESPPCHPREDRFHQENGMSEVRVRQQRE 145

Human   120 ---------------------------------EPATTARGG--------PGKAGSRGRFAGHSE 143
                                             ||:...|..        |.|.|:|....|...
 Frog   146 DGQRGSERNRSEHSRRERQREEHKAVPQQPRGQEPSNKHRPPPPDYPKDIPEKRGTRSHEKGDGR 210

Human   144 AGGGSGDR-----------RRAGPEKRPKSSREGSGGPQESSRDKRPLSGPDVGTPQPAGLASGA 197
            ......||           |..|.|||||||...:.|..:|.|||||||||.:.||..:......
 Frog   211 REYPVNDRGYSEPVERVVKREKGEEKRPKSSYTSAEGSPQSPRDKRPLSGPSIRTPGSSSTEGVV 275

Human   198 K-LAAGRPFNTYPRADTDHPSRGAQGEPHDVAPNGPSAGGLAIPQS-SSSSSRP-----PTRARG 255
            | ...||.|||||||:|| |||||   ||.| |:..|...|....: |.|||||     ..:...
 Frog   276 KQTQTGRAFNTYPRAETD-PSRGA---PHQV-PDSHSTVPLDSKSTVSKSSSRPQQGQVKPKLPD 335

Human   256 APSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSY 320
            .|.|..|.||:|:|||:.|..|      ..|..|||||||||||||||||||||:||||||||:|
 Frog   336 KPHPTQLVPHSSDPQLSHPVQT------QHPAQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTY 394

Human   321 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 385
            |||||||||||||||||||::||||||||||||||||||||||||||||||||||||||||||||
 Frog   395 LDNFIKIGEGSTGIVCIATIKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 459

Human   386 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 450
            ||||||||:||||||||||||||||||||||||.||::||:||||||||||||||||||||||||
 Frog   460 LVGDELWVIMEFLEGGALTDIVTHTRMNEEQIATVCVSVLKALSVLHAQGVIHRDIKSDSILLTH 524

Human   451 DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 515
            |||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   525 DGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 589

Human   516 FNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 580
            ||||||||||||||||||:|||..||||.|||||||||||||:|||:|.||||||||.|||||:.
 Frog   590 FNEPPLKAMKMIRDNLPPKLKNAQKVSPLLKGFLDRLLVRDPSQRASANELLKHPFLGKAGPPSC 654

Human   581 IVPLMRQNRTR 591
            |||||||||.|
 Frog   655 IVPLMRQNRLR 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAK4NP_005875.1 CRIB_PAK_like 10..55 CDD:238526 41/44 (93%)
Linker 25..320 170/364 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..301 101/275 (37%)
GEF-interaction domain (GID) 298..323 22/24 (92%)
STKc_PAK4 300..591 CDD:132988 270/290 (93%)
pak4XP_012823244.1 CRIB_PAK_like 24..70 CDD:238526 41/45 (91%)
Protein Kinases, catalytic domain 374..665 CDD:473864 270/290 (93%)

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