DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APC2 and Apc2

DIOPT Version :9

Sequence 1:XP_006722671.2 Gene:APC2 / 10297 HGNCID:24036 Length:2404 Species:Homo sapiens
Sequence 2:NP_001334699.1 Gene:Apc2 / 42871 FlyBaseID:FBgn0026598 Length:1067 Species:Drosophila melanogaster


Alignment Length:1469 Identity:393/1469 - (26%)
Similarity:561/1469 - (38%) Gaps:502/1469 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   385 ATRDQEDTARTLLAMSSSPESCVAMRRSGCLPLLLQILHGTEAAAGGRAGAPGAPGAKDARMRAN 449
            |||  .:..|..|.:|.:||:|.|:|.|.|:.||:||||..:            .|...|:..|:
  Fly     8 ATR--LELTRNFLELSRNPETCTALRSSDCIQLLVQILHAND------------EGLSTAKKYAS 58

Human   450 AALHNIVFSQPDQGLARKEMRVLHVLEQIRAYCETCWDWLQARDGGPEGGGAGSAPIPIEPQICQ 514
            .||||||.:.|::...::|:::|.:|:||..||......||:      ||.|.:......|  ..
  Fly    59 QALHNIVHNNPEEKERQREVKMLRLLDQILDYCNFLHTQLQS------GGEAIADDEDRHP--LA 115

Human   515 ATCAVMKLSFDEEYRRAMNELGGLQAVAELLQVDYEMH--KMTRDPLNLALRRYAGMTLTNLTFG 577
            |...:||.|||||:|:.|.|||.|:|:..|:.:|:.:|  ...|:..| |||.|..|.|||||||
  Fly   116 AMKLLMKASFDEEHRQTMCELGALKAIPNLVHLDHAVHGPAAGREQCN-ALRSYGLMALTNLTFG 179

Human   578 D--VANKATLCARRGCMEAIVAQLASDSEELHQVVSSILRNLSWRADINSKKVLREAGSVTALVQ 640
            |  |.||:.||.:|..||.::|||.:..:||.||::.:|||||||||.:.|.:..|.|:||:|.:
  Fly   180 DENVHNKSYLCGQRQFMEVVIAQLNTAPDELLQVLAGVLRNLSWRADKHMKTIFNELGTVTSLAR 244

Human   641 CVLRATKESTLKSVLSALWNLSAHSTENKAAICQVDGALGFLVSTLTYKCQSNSLAIIESGGGIL 705
            ..::...|:|||::||||||||||.:.|||..|.|||||.|||..|:|:..|.:|.|||:.||||
  Fly   245 AAMQNKNENTLKAILSALWNLSAHCSTNKAEFCAVDGALAFLVGMLSYEGPSKTLKIIENAGGIL 309

Human   706 RNVSSLVATREDYRQVLRDHNCLQTLLQHLTSHSLTIVSNACGTLWNLSARSARDQELLWDLGAV 770
            |||||.:|..|.|||:||.:|||..|||.|.|.|||:|||:||||||||||...||:.|.|..|:
  Fly   310 RNVSSHIAVCEPYRQILRRYNCLAILLQQLKSESLTVVSNSCGTLWNLSARCPEDQQYLIDHNAI 374

Human   771 GMLRNLVHSKHKMIAMGSAAALRNLLAHRPAKHQAAATAVSPGSCVPSLYVRKQRALEAELDARH 835
            .:||.|:.||:.|||.|||:||:||:..|                                    
  Fly   375 PLLRALISSKNSMIAEGSASALKNLVNFR------------------------------------ 403

Human   836 LAQALEHLEKQGPPAAEAATKKPLPPLRHLDGLAQDYASDSGCFDDDDAPSSLAAAAATGEPASP 900
                              ||::.:|            ..|.|                       
  Fly   404 ------------------ATQELMP------------NGDGG----------------------- 415

Human   901 AALSLFLGSPFLQGQALARTPPTRRGGKEAEKDTSGEAAVAAKAKAKLALAVARIDQLVEDISAL 965
               ||.|......|..|.|.                                         .|:|
  Fly   416 ---SLPLDKEAGHGGTLPRR-----------------------------------------FSSL 436

Human   966 HTSSDDSFSLSSGDPGQEAPREGRAQSCSPCRGPEGGRREAGSRAHPLLRLKAAHASLSNDSLNS 1030
            ..||:.:.||....|...:......:.|.                             |.:|:.|
  Fly   437 RLSSNPTGSLKKVRPSTVSTTGFLNRKCE-----------------------------SRESIYS 472

Human  1031 G-SASDGYCPREHMLPCPLAALASRREDP-----RCGQPRPS-----RLDLDLP----------- 1073
            | |.|..|..:......|...:....|.|     :..:.:|:     .:|||.|           
  Fly   473 GKSDSTKYSTKSEGAKNPFEIVTPTEEQPIDYSMKYMEHKPNSSKTFEIDLDQPTDFSARYKERR 537

Human  1074 GCQAEPPAREATSADARVRTIKLSPTYQHVPLLEGASRAGAEPLAGPG-ISPGARKQAWLPADHL 1137
            ..|...|..::.:.:.|.:.::|:           .|.:..|....|| ::..|.||     ...
  Fly   538 SAQTAQPELKSETNEIRSKELQLT-----------KSSSATELRNSPGLVAVSAAKQ-----KIA 586

Human  1138 SKVPEKLAAAPLSVASKALQKLAAQEG-PLSLSRCSSLSSLSSAGRPGPSEGGDLDDSDSSLEGL 1201
            ::...:.|..|::.         .:|| |.|.||..||:||:                    |..
  Fly   587 TETETETAERPINY---------CEEGTPGSFSRFDSLNSLT--------------------EKP 622

Human  1202 EEAGPSEAELDSTWRAPGATS-LPVAIPAPRRNRGRGLGVEDATPSSSSENYVQETPLVLSRCSS 1265
            |:..|.        :.|..|: |||             .|:..||.:...  ..||||:.||.||
  Fly   623 EKCMPP--------KTPTKTAVLPV-------------HVDGNTPQNIDS--ALETPLMFSRRSS 664

Human  1266 VSSL-GSFESPSIA--SSIPSEPCSGQGSGTISPSELPDSPGQTMPPSRSKTPPLAPAPQGPPEA 1327
            :.|| |..|:.:..  .|:.|| .|...||.||||||||||.|:|             ||.|...
  Fly   665 MDSLVGDDETVACEDNGSVISE-YSRMQSGVISPSELPDSPTQSM-------------PQSPRRD 715

Human  1328 TQFSLQWESYVKRFLDIADCRERCRLPSELDAGSVRFTVEKPDENFSCASSLSALALHEHYVQQD 1392
            .:.|.|      ..||..:.:.......:|:    ||.||.....||||:|||.|::     ..|
  Fly   716 RKVSTQ------NNLDTPEQKPSTVFEDKLN----RFHVEHTPAAFSCATSLSNLSM-----MDD 765

Human  1393 VELRLLPSACPERGGGAGGAGLHFAGHRRREEGPAP--------TGSRPRGAADQELELLRECLG 1449
            .....:..   :||....|            .|.||        |....:..::.:|.:|     
  Fly   766 SNANAIRG---QRGNDING------------NGDAPRSYCTEDTTAVLSKAPSNSDLSIL----- 810

Human  1450 AAVPARLRKVASALVPGRRA--------LP--------------VPVYMLVPAPAPAQEDDSCTD 1492
             ::|..|....:..||..||        :|              :|.|:.|       .|:....
  Fly   811 -SIPNDLNANEAQPVPAPRADVTGMDTRMPAEDAISKMRCGGNALPSYLPV-------SDEMSKY 867

Human  1493 SAEGTPVNFSSAASLSDETLQGPPRDQPGGPAGRQRPTGRPTSARQAMGHRHKAGGAGRSAEQSR 1557
            ..|.:|..||..:.||..|:                                             
  Fly   868 YVEDSPCTFSVISGLSHLTV--------------------------------------------- 887

Human  1558 GAGKNRAG--LELPLGRPPSAPADKDGSKPGRTRGDG----------ALQSLCLTTPTEEAVYCF 1610
              |..:||  |:||:.....|.|.|...:....:||.          :|.||.:           
  Fly   888 --GSAKAGPVLKLPMRTAEEAQAPKLPPRRSAVQGDAEPRLPPKKSDSLSSLSM----------- 939

Human  1611 YGNDSDEEPPAAAPTPTHRRTSAIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADETP 1675
               |||::        .:..:.||.....|.:|.|                 |.|..||      
  Fly   940 ---DSDDD--------CNLLSQAIAAGSCRPQPSG-----------------ASTSSSL------ 970

Human  1676 PCYSLSSSASSL-SEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALP 1739
                .::|.|:| .|...|:....|  |.:|..:.|    ...|.......::.|.::||     
  Fly   971 ----ANASTSTLCRENGQSKKQVEH--GDKPNYSSD----DSLDDDDDDARSKSLFEQCI----- 1020

Human  1740 RRRPPVSGLRRRKPRATRLDERPAEGSRERGEEAAGSDR 1778
                 :||:.:.........|.|  |.|   :|.:..||
  Fly  1021 -----LSGMHKSNDALESEGEPP--GQR---QEISARDR 1049



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147381
Domainoid 1 1.000 191 1.000 Domainoid score I3246
eggNOG 1 0.900 - - E1_KOG2122
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002986
OrthoInspector 1 1.000 - - mtm8653
orthoMCL 1 0.900 - - OOG6_105450
Panther 1 1.100 - - O PTHR12607
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2401
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.770

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