Sequence 1: | NP_005870.2 | Gene: | TRAIP / 10293 | HGNCID: | 30764 | Length: | 469 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_611305.1 | Gene: | nopo / 37083 | FlyBaseID: | FBgn0034314 | Length: | 435 | Species: | Drosophila melanogaster |
Alignment Length: | 452 | Identity: | 117/452 - (25%) |
---|---|---|---|
Similarity: | 200/452 - (44%) | Gaps: | 97/452 - (21%) |
- Green bases have known domain annotations that are detailed below.
Human 7 CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINKLFFDLAQEEE 71
Human 72 NVLDAEFLKNELDNVRAQLSQKDKEK-RDSQVIIDTLRDTLEERNATVVSLQQALGKAEMLCSTL 135
Human 136 KKQMKYLEQQQDETKQAQEEARRLRSKMKTMEQIELLLQSQRPEVEEMIRDMGVGQSAVEQLAVY 200
Human 201 CVSLKKEYENLK----EARKASGEVADKLRKDLFSSRSKLQTVYSELD------QAKL---ELKS 252
Human 253 AQKDLQSA----DKEIMSLKKKLTMLQETLNLPPVASETVDRLVLESPAPVEVNLKLRRPSFRDD 313
Human 314 IDLNATFDVDTPPARPSSSQHGYYE------KLCLEKSH-SPIQDVPKKICKGPRKESQLSLGGQ 371
Human 372 SCAG----EPDEELVGAFPIFVRNAILGQKQPKRPRSESSCSKDVVRTG----FDGLGGRTK 425 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TRAIP | NP_005870.2 | RING-H2_TRAIP | 6..50 | CDD:319394 | 20/42 (48%) |
RING-H2 finger (C3H2C3-type) | 7..49 | CDD:319394 | 19/41 (46%) | ||
SMC_N | <68..>279 | CDD:330553 | 55/228 (24%) | ||
Interaction with CYLD. /evidence=ECO:0000269|PubMed:14676304 | 211..469 | 57/247 (23%) | |||
PIP-box. /evidence=ECO:0000269|PubMed:26711499 | 460..469 | ||||
nopo | NP_611305.1 | zf-RING_2 | 5..47 | CDD:290367 | 20/42 (48%) |
zf-rbx1 | <5..47 | CDD:289448 | 20/42 (48%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 67 | 1.000 | Domainoid score | I9870 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0827 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 112 | 1.000 | Inparanoid score | I4869 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5511 |
OMA | 1 | 1.010 | - | - | QHG50113 | |
OrthoDB | 1 | 1.010 | - | - | D581741at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006979 | |
OrthoInspector | 1 | 1.000 | - | - | oto90577 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107085 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46569 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4425 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.790 |