DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDKN2A and Cdkn2b

DIOPT Version :10

Sequence 1:XP_011515977.1 Gene:CDKN2A / 1029 HGNCID:1787 Length:184 Species:Homo sapiens
Sequence 2:NP_570825.1 Gene:Cdkn2b / 25164 RGDID:2324 Length:130 Species:Rattus norvegicus


Alignment Length:120 Identity:105/120 - (87%)
Similarity:111/120 - (92%) Gaps:0/120 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    16 LATAAARGRVEEVRALLEAGALPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTR 80
            ||||||||:||.||.||||||.|||.|.:|||||||||||||:||||||||||||||||||||||
  Rat    10 LATAAARGQVETVRQLLEAGADPNAVNRFGRRPIQVMMMGSAQVAELLLLHGAEPNCADPATLTR 74

Human    81 PVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG 135
            ||||||||||||||:|||:|||||||.|||||||||||||.||||:||||.||.|
  Rat    75 PVHDAAREGFLDTLMVLHKAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKN2AXP_011515977.1 ANKYR <16..148 CDD:440430 105/120 (88%)
ANK repeat 16..42 CDD:293786 21/25 (84%)
ANK repeat 44..74 CDD:293786 27/29 (93%)
ANK repeat 76..108 CDD:293786 29/31 (94%)
Cdkn2bNP_570825.1 ANK 1 5..34 19/23 (83%)
ANKYR <10..130 CDD:440430 105/120 (88%)
ANK repeat 10..36 CDD:293786 21/25 (84%)
ANK repeat 38..68 CDD:293786 27/29 (93%)
ANK 2 38..66 25/27 (93%)
ANK repeat 70..102 CDD:293786 29/31 (94%)
ANK 3 71..100 26/28 (93%)
ANK 4 104..130 22/26 (85%)

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