DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDKN1C and cdknx

DIOPT Version :10

Sequence 1:NP_000067.1 Gene:CDKN1C / 1028 HGNCID:1786 Length:316 Species:Homo sapiens
Sequence 2:XP_002934672.1 Gene:cdknx / 100126686 XenbaseID:XB-GENE-1032978 Length:207 Species:Xenopus tropicalis


Alignment Length:301 Identity:75/301 - (24%)
Similarity:113/301 - (37%) Gaps:134/301 - (44%)


- Green bases have known domain annotations that are detailed below.


Human    29 ACRSLFGPVDHEELSRELQARLAELNAEDQNRWDYDFQQDMPLRGPGRLQWTEVDSDSVPAFYRE 93
            |||:||||:||:||..||:.:|.|:.|.|..||::||:...||:  |...|..|:|..||.||.:
 Frog    28 ACRNLFGPIDHDELRSELKRQLKEIQASDCQRWNFDFESGTPLK--GIFCWESVESKDVPTFYSQ 90

Human    94 -------TVQVGRCR--LLLAPRPVAVAVAVSPPLEPAAESLDGLEEAP-EQLPSVPVPAPASTP 148
                   |....|.:  ||::.:|           ||.       |||| :.:.:||.|      
 Frog    91 NRSSAANTTTPSRQQQPLLVSRQP-----------EPR-------EEAPLDTVRNVPNP------ 131

Human   149 PPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPA 213
                                                         |.|                 
 Frog   132 ---------------------------------------------PCA----------------- 134

Human   214 PAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAIKKLSGPLISDFFAK 278
                   :|:||:...:.|            |:.| ||..:|..|..... ::::.| |:|:|.|
 Frog   135 -------KENAEKTIKRCQ------------GVKG-PAKASAIPSTQHRK-REITTP-ITDYFPK 177

Human   279 RKR---SAPEKSSGDVPAPCPSPSAAPGVGSVEQTPRKRLR 316
            ||:   :.|:.:.| ....||          :||||||::|
 Frog   178 RKKILGAKPDATKG-AHLLCP----------LEQTPRKKIR 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKN1CNP_000067.1 CDI 33..79 CDD:460503 21/45 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..153 7/29 (24%)
9 X 4 AA repeats of P-A-P-A 156..213 2/56 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..260 12/78 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 278..316 13/40 (33%)
Nuclear localization signal. /evidence=ECO:0000255 278..281 2/2 (100%)
cdknxXP_002934672.1 CDI 32..77 CDD:460503 21/46 (46%)

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