DRSC/TRiP Functional Genomics Resources

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Protein Alignment STAG1 and psc3

DIOPT Version :10

Sequence 1:NP_005853.2 Gene:STAG1 / 10274 HGNCID:11354 Length:1258 Species:Homo sapiens
Sequence 2:NP_001343016.1 Gene:psc3 / 2542387 PomBaseID:SPAC17H9.20 Length:962 Species:Schizosaccharomyces pombe


Alignment Length:1040 Identity:213/1040 - (20%)
Similarity:408/1040 - (39%) Gaps:206/1040 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     1 MITSELPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPPSTNKKPRKSPGEKSRIEAGIR 65
            |::.....:..|:| :::..::..:.|:| :..|::..||      |.|             |: 
pombe    22 MLSQSFDPMSSSSN-SSSEENSDDDYEKT-ISSKKRHPRP------NSK-------------GV- 64

Human    66 GAGRGRANGHPQQNGEGEPV-TLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDLINFFIQCSG 129
            ...|.|.|...:::.:.|.. .||..:...|.....:...|...|.:|...||.:||||.::|.|
pombe    65 NVKRSRRNAIVEEDPQEEIFNNLFAFLLDQKVDTMDIAVSWFADYAKDNQSALANLINFILKCCG 129

Human   130 CRGTVRIEMFRNMQNAEIIRKMTEEFDE--DSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQCQY- 191
            |...:.:...::..:|.......:...|  .:.||||.....:::.||......:...:.|... 
pombe   130 CNRAINVFDVQDQDSASATLSQIQLSVERTSTRDYPLNSKNLKFRNFRKRLTGLLSNFVSQLSIR 194

Human   192 SIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEAE-- 254
            :.:|:..:.:.::|.:..:|.|.:|..|||:|:..:.:||.|...:..|........:|.|.|  
pombe   195 NYLYNSTVFEDIMSWVVAMSSSTMRPIRHTATVFCLNIMTFLCEKSKELLNEHAIATKQLEKEEK 259

Human   255 RNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWM 319
            |:::...|.||    |.....|:.:.||.:...:|..|..:|||||||...:||..|::|:|||:
pombe   260 RSRVNRNRINE----LNNSLGEIVKQQDTLTTYLNDYFDSVFVHRYRDVEPKIRVDCLQELGVWI 320

Human   320 KMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELFTNRFKDRIVSMT-L 383
            ......|.:.|||:|:||.|.|....|||..:|.|:..:........|..|::|||:||:.|: :
pombe   321 NTVPSIFFSGSYLRYLGWMLSDINTTVRLTVVKVLRKFFETDSFIGGLRHFSSRFKERILEMSCV 385

Human   384 DKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQ-- 446
            |.:..|.|.:|||...:  .:...|.|.:...|..|:...:..|...|..||.|.:....:.:  
pombe   386 DADIGVRVASIRLCNAM--RTCGFLENSEILKVLKLILDINPRVQREAVLFLCKVVDESVNEKID 448

Human   447 ---AEEALAKRRGRNS---------------------------------------PNGNLIRMLV 469
               .|:.:.|...:.|                                       .|||.|..:.
pombe   449 LWGEEDYILKAFSQTSLTTFSVHWIKFSQMCKLLEEVRLSYQSSFDYDTLLRIFQKNGNFITPIT 513

Human   470 LFFLESELHEHAAYLVDSLWESSQELLKDWECMTELL--------LEEPVQGEEA---MSDRQES 523
            ...|.       |..:||:::|       ||.::..:        |::|:....:   ::|.|||
pombe   514 QALLN-------ACEIDSIYQS-------WEDISNFVLFDNYTSTLKDPIDSILSFCKLNDFQES 564

Human   524 ALIELMVCTIRQAAEAH--PPVGRGTGKRVLTAKERKTQIDDRNKLTE-HFIITLPMLLS---KY 582
            .|::|:..:|:.....:  .|       :.:..|:.....:|:||..: .::..||.:.|   :.
pombe   565 ILLQLLSASIQTVCNNNFITP-------KTVHNKQAAETTNDQNKDKDLLYLNLLPYINSITERN 622

Human   583 SADAEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTY----SIL 643
            ||....:.:.|::....||...:..::.:|.:.|:..:|.....:.:..:::.|:..:    ||.
pombe   623 SASPTLLHDSLRLLFSMDLTEMTDPQLSRHFELLINNLKKFFLTNNDLQIIQGCTILFLRLDSIP 687

Human   644 CSEEYTIQNRVDIARSQLIDEFVDRF-NHSVEDLLQEGEEADDDDIYNV-LSTLKRLTSFHNAHD 706
            ..:|.......||. .|.:.||:..| :.:::|.:   ...|:..|:.. |:.::..||..:..|
pombe   688 ALKEDLKLLVTDIC-DQTVTEFLKNFGSFNIQDAV---ITKDEFVIFEACLTRIEGCTSLKDFSD 748

Human   707 LTKWDLFGNCYRLLKTGIEH--GAMPEQIVVQALQCSHYSILWQLVK---ITDGSPSKEDLLVLR 766
            ..::|:.   |..|.:.:..  .:..:.:...|:......:.|..::   ..|....|:|     
pombe   749 YPEFDII---YERLVSLLSRVPNSYEDTLKFSAINTLQSLLFWFFLRKDNPADEEKKKDD----- 805

Human   767 KTVKSFLAVCQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLS 831
             ..|.|     .||.|                                   :.|.|:   |::|.
pombe   806 -ETKVF-----NCLIN-----------------------------------IMNNDS---SKILQ 826

Human   832 FVMDHVFIDQDEENQSMEGDEEDEANKIEALHK--RRNLLAAFSKLI---IYDIVDMHAAADIFK 891
            ......|::.....:.::....::.|::...|.  :...|.|..|::   :|....:....  ||
pombe   827 LQAARTFLETVIMKEGVKASHYNDDNRVSEEHNFLKPQFLDALLKILEGWLYTYAKVGQFP--FK 889

Human   892 HYMKYYNDYGDII--KETLSKTRQIDKIQCAKT----LILSL--------QQLFNELVQEQGPNL 942
            ...:..:.:..|.  |..|:: |.::.:.|..|    :::||        .|.|.||....||.|
pombe   890 RLTQASSPHTQISLDKNPLNR-RLLEHVCCDLTSKLLIVVSLSNTITPEFSQQFCELRGHYGPKL 953

Human   943  942
            pombe   954  953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STAG1NP_005853.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..84 14/82 (17%)
IRR1 12..>398 CDD:227824 106/392 (27%)
STAG 160..273 CDD:462502 28/115 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1055..1096
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1129..1148
psc3NP_001343016.1 IRR1 1..724 CDD:227824 166/754 (22%)
Blue background indicates that the domain is not in the aligned region.

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