Sequence 1: | NP_001353524.1 | Gene: | SRRM1 / 10250 | HGNCID: | 16638 | Length: | 918 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_648627.1 | Gene: | Srrm1 / 39483 | FlyBaseID: | FBgn0036340 | Length: | 954 | Species: | Drosophila melanogaster |
Alignment Length: | 1056 | Identity: | 327/1056 - (30%) |
---|---|---|---|
Similarity: | 467/1056 - (44%) | Gaps: | 256/1056 - (24%) |
- Green bases have known domain annotations that are detailed below.
Human 6 FRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEF 70
Human 71 IFNQL-EVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQR 134
Human 135 QIEQEKLASMKKQDEDKDK-RDKEEKESSR--EKRERSRSPRRRKSRSPSP-------------- 182
Human 183 ---------RRRSSPVRR--ERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQ 236
Human 237 EATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRR 301
Human 302 HRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRR--RSSASLSGSSSSSSS 364
Human 365 SRSRSPPKKPPKRTSSPPRKTRRLSPSASPP-------------------RRRHRPSPPATPPPK 410
Human 411 TRHSPTPQQSNRTRKSRV------SVSPGRTSG--KVTKHKG------------TEKRESPSPAP 455
Human 456 KPRKVELSESEEDKGGKMAAADSVQ--QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVG 518
Human 519 RRRRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRR 583
Human 584 RRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR 648
Human 649 VSHSPP---------------------------PKQRSSPVTKRRSPS----------------- 669
Human 670 ----LSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTS-SSPPPVRRGASSSPQRRQS-P 728
Human 729 SPSTRPIRRVSRTPEPKKIKKAAS-------PSPQSVRRVSSSRS-----VSGSPEPAA------ 775
Human 776 KKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHK 840
Human 841 KHKKHKKEKAVAAAAAAAVT----------PAAIAAATTTLAQEEPVAAPEPKKETESEAEDNLD 895
Human 896 DLEKHLREKALRSMRK 911 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SRRM1 | NP_001353524.1 | Necessary for mRNA 3'-end cleavage and cytoplasmic accumulation | 1..156 | 87/151 (58%) | |
Necessary for DNA and RNA-binding | 1..151 | 86/145 (59%) | |||
PWI | 46..115 | CDD:396183 | 47/69 (68%) | ||
PHA03307 | <620..>754 | CDD:223039 | 37/190 (19%) | ||
Srrm1 | NP_648627.1 | PWI | 43..113 | CDD:279781 | 47/69 (68%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165148025 | |
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6731 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2146 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3004 |
OMA | 1 | 1.010 | - | - | QHG46603 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0005511 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_103077 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23148 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1912 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.820 |