DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDK9 and Cdk5

DIOPT Version :10

Sequence 1:NP_001252.1 Gene:CDK9 / 1025 HGNCID:1780 Length:372 Species:Homo sapiens
Sequence 2:NP_477080.1 Gene:Cdk5 / 36727 FlyBaseID:FBgn0013762 Length:294 Species:Drosophila melanogaster


Alignment Length:311 Identity:119/311 - (38%)
Similarity:177/311 - (56%) Gaps:36/311 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 80
            :.||:|:.|||:||:|.|||.|:|.|.:.||||:|.::.:.||.|.:|||||.:|:.|||:|:|.
  Fly     1 MQKYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVR 65

Human    81 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI 145
            ||::..:..        .:.|||:.|:.||.....::..:..::..:..|..||.||.:.|.:.:
  Fly    66 LIDVLHSDK--------KLTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNV 122

Human   146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI 210
            ||||:|..|:||.::|.||||||||||||.:....    |:..|||||||||::|.|.:.|...|
  Fly   123 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKC----YSAEVVTLWYRPPDVLFGAKLYTTSI 183

Human   211 DLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL--------- 265
            |:|.||||:||:.... |:..|:....||..|.::.|:...:.||.|.:...|..|         
  Fly   184 DMWSAGCILAELADAGRPLFPGSDVLDQLMKIFRVLGTPNEDSWPGVSHLSDYVALPSFPAITSW 248

Human   266 -ELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
             :||        .||.:..|     ||:.|||:..|.|||.::.|:.|.:|
  Fly   249 SQLV--------PRLNSKGR-----DLLQKLLICRPNQRISAEAAMQHPYF 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK9NP_001252.1 STKc_CDK9 6..315 CDD:270848 118/309 (38%)
T-loop 166..191 11/24 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..372
Cdk5NP_477080.1 STKc_CDK5 3..286 CDD:143344 118/307 (38%)
Blue background indicates that the domain is not in the aligned region.

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