| Sequence 1: | NP_001095868.1 | Gene: | HNRNPR / 10236 | HGNCID: | 5047 | Length: | 636 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_013995.1 | Gene: | PRP24 / 855310 | SGDID: | S000004881 | Length: | 444 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 288 | Identity: | 70/288 - (24%) |
|---|---|---|---|
| Similarity: | 134/288 - (46%) | Gaps: | 41/288 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Human 165 TEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAV----KL 225
Human 226 CDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTGLTEGLVDVILYHQPDDK-K 289
Human 290 KNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV--KVLFVRNLA 352
Human 353 TTVTEE-ILEKSFSEFGKLERV-----KKLKDY----AFVHFEDRGAAVKAMDEMNGKEIEGEEI 407
Human 408 EIVLAKPPDKKR-KERQAARQ--ASRST 432 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| HNRNPR | NP_001095868.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..24 | ||
| NURR_hnRNPR | 27..110 | CDD:410955 | |||
| hnRNP-R-Q | 106..631 | CDD:273732 | 70/288 (24%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 415..459 | 8/21 (38%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 415..421 | 3/6 (50%) | |||
| RNA-binding RGG-box | 450..570 | ||||
| 3 X 11 AA approximate repeats of D-D-Y-Y-G-Y-D-Y-H-D-Y | 465..500 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 504..636 | ||||
| PRP24 | NP_013995.1 | RRM1_Prp24 | 41..113 | CDD:409737 | 19/74 (26%) |
| RRM2_Prp24 | 117..195 | CDD:409738 | 14/91 (15%) | ||
| RRM3_Prp24 | 210..286 | CDD:409739 | 22/76 (29%) | ||
| RRM4_Prp24 | 312..386 | CDD:409740 | |||
| Lsm_interact | 425..443 | CDD:398843 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||