DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RASGRP2 and Rgl

DIOPT Version :10

Sequence 1:XP_011543020.1 Gene:RASGRP2 / 10235 HGNCID:9879 Length:715 Species:Homo sapiens
Sequence 2:NP_001261814.1 Gene:Rgl / 44115 FlyBaseID:FBgn0026376 Length:973 Species:Drosophila melanogaster


Alignment Length:562 Identity:123/562 - (21%)
Similarity:196/562 - (34%) Gaps:167/562 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   164 IYQQSRKDNSNSLQVKTCHLVRYWISAFPAEF---DLNPELAEQIKELK-------------ALL 212
            |::|.:|...::|.|        |:..||.::   :|...||...|.||             .|:
  Fly   321 IHEQHKKTLVSALHV--------WLDGFPEDWHEDNLQQILAFATKRLKRSDLHIKVLNRLERLI 377

Human   213 DQ-----------EGNRRHSSLIDIDS-------VPT-YKWKRQVTQR-----------NPV--G 245
            .|           ..|..||.|....|       :|| |.....:|.:           .|:  |
  Fly   378 KQSLYGNGGGSGGSENNGHSWLSAARSQQMQQFMIPTHYGSSYDLTDQFNGMYLSPMGHGPIYRG 442

Human   246 QKKRKMSLLFDHLEPMELAEHLTYLEYRSFCKILFQDYHSFVTHGC---------TVDNPVLERF 301
            ......:..|.|:.....||.||.::...|.::        :.|.|         :..:..:...
  Fly   443 PTHFLQAFRFPHVPVRHFAEQLTRMDTELFKRL--------IPHQCLGHTWARRDSGGSETVVAT 499

Human   302 ISLFNSVSQWVQLMILSKPTAPQ-RALVITHFVHVAEKLLQLQNFNTLMAVVGGLSHSSISRLKE 365
            |:.||:|...|...||.....|| |||.|:.::.:|::|..|:||::|.|::..|:.:||.||. 
  Fly   500 INQFNAVLFRVVSSILIDRLKPQERALNISRWIDIAQELRMLKNFSSLKAIISALNSNSIYRLS- 563

Human   366 THSHVSPETIKLWEGL--------TELVTATGNYGN--------------------------YRR 396
                      |:||.|        |||........|                          :.:
  Fly   564 ----------KIWEVLPKERMEVFTELANICSEDNNAWTLREVLKREGTAKNPDPGSDHSDRHLQ 618

Human   397 RLAACVGFR-----FPILGVHLKDLVALQLALPDWLDPARTRLNGAKMKQLFSILEELAMVTSLR 456
            :|...:|.:     .|.||..|.||..:..|.||:|...:. :|..|.::.|.:|.::.::....
  Fly   619 KLILNLGTQTSHGTIPYLGTFLTDLTMIHTANPDYLTENKL-INFDKKRKEFEVLAQIKLLQGAA 682

Human   457 PPVQANPDLLSLLTVSLDQYQT------EDELYQLSLQREPRSKSSPTSPTSCTPPPRP--PVLE 513
            .......|.|      .|.:..      |.|.::||.:.||             |||.|  .|:.
  Fly   683 NTYNLQADAL------FDHWFNSMPVFDEREAFELSCRLEP-------------PPPAPRKSVVS 728

Human   514 EWTSAAKPKLDQ-ALVVEHIEKMVESVFRNFDVDGDGHISQEEFQIIRGNFPYLSAFGDLDQN-- 575
            ..||........ |.::.|  :..:|:..|   ...|..||...::   |....|....||::  
  Fly   729 TNTSLTNTTASSTASIMGH--RKTDSIHSN---SSSGAGSQFYCEL---NSSTSSRHNSLDRDVH 785

Human   576 --QDGCISREEMVSYFLRSSSVLGGRMG--FVHNFQESNSLR 613
              ....:|....||.....||..|||..  ..|:....|.|:
  Fly   786 HQHASLMSASSSVSNLSLDSSNSGGRQSGKLTHSQSMGNGLK 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RASGRP2XP_011543020.1 RasGEF 255..492 CDD:214539 66/291 (23%)
FRQ1 <512..589 CDD:444056 16/81 (20%)
C1 601..656 CDD:412127 3/15 (20%)
RglNP_001261814.1 REM 246..378 CDD:100121 15/64 (23%)
RasGEF 454..719 CDD:214539 66/303 (22%)
RA_RalGDS_like 858..946 CDD:340449
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.