DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPA33 and Gpa33

DIOPT Version :9

Sequence 1:NP_005805.1 Gene:GPA33 / 10223 HGNCID:4445 Length:319 Species:Homo sapiens
Sequence 2:NP_067623.1 Gene:Gpa33 / 59290 MGIID:1891703 Length:319 Species:Mus musculus


Alignment Length:315 Identity:211/315 - (66%)
Similarity:256/315 - (81%) Gaps:0/315 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MVGKMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTH 65
            |:||...|:|..||:.|..||::|||.||:|||::|:||||||||:|..|.|||.|||||||.:.
Mouse     1 MLGKAGSVVWMFCAIWVAADALTVETTQDILRAARGRSVTLPCTYNTYVSDREGFIQWDKLLRSQ 65

Human    66 TERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTK 130
            |||||.|.|..|.||:|..|:|||.:||:||.|:||||||||||.||||||||||||||.:.|.|
Mouse    66 TERVVTWNFVTKKYIYGNRYENRVRVSNDAELSNASITIDQLTMDDNGTYECSVSLMSDQDVNAK 130

Human   131 SRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQP 195
            ||||||||||||||:|.|:||.:|||||||||.|.||||:||||||.||..||::||.||.||:|
Mouse   131 SRVRLLVLVPPSKPDCSIQGEMVIGNNIQLTCHSAEGSPSPQYSWKSYNAQNQQRPLTQPVSGEP 195

Human   196 VSLKNISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAALIIIGIIIYCCC 260
            :.||||||:|:|||||||||:.|.:.||||||.|.||||:|||.|||..|..||||||:|:||||
Mouse   196 LLLKNISTETAGYYICTSSNDVGIESCNITVAPRPPSMNIALYAGIAGSVFVALIIIGVIVYCCC 260

Human   261 CRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDDYRQEEQRSTGRESPD 315
            ||.|||..:|:|||||||.||:.|.::.:|:||.||:|||:|.|::.|:||.:||
Mouse   261 CREKDDKDQDREDARPNRAAYQVPKKEQKEISRGREDEDDHRHEDRWSSGRSTPD 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPA33NP_005805.1 V-set 26..138 CDD:311561 79/111 (71%)
IGc2 154..218 CDD:197706 47/63 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..319 26/49 (53%)
Gpa33NP_067623.1 V-set 31..138 CDD:284989 76/106 (72%)
IG_like 31..137 CDD:214653 75/105 (71%)
IG_like 151..226 CDD:214653 52/74 (70%)
IGc2 154..218 CDD:197706 47/63 (75%)
Shisa <240..>262 CDD:290619 15/21 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..319 26/49 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83966188
Domainoid 1 1.000 157 1.000 Domainoid score I32613
eggNOG 1 0.900 - - E1_2CMNJ
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4245
Inparanoid 1 1.050 453 1.000 Inparanoid score I12913
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG39558
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001092
OrthoInspector 1 1.000 - - oto120600
orthoMCL 1 0.900 - - OOG6_113186
Panther 1 1.100 - - LDO PTHR44969
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9169
SonicParanoid 1 1.000 - - X10293
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1717.290

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