DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPA33 and zig-10

DIOPT Version :10

Sequence 1:NP_005805.1 Gene:GPA33 / 10223 HGNCID:4445 Length:319 Species:Homo sapiens
Sequence 2:NP_001122644.1 Gene:zig-10 / 188896 WormBaseID:WBGene00020800 Length:322 Species:Caenorhabditis elegans


Alignment Length:284 Identity:56/284 - (19%)
Similarity:98/284 - (34%) Gaps:86/284 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    36 GKSVTLPCTYHTSTSSREGLIQW--DKLLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQS 98
            |.:..|.|..:||::     :.|  ||.::...|       .:||.|..| .|.|     ..|:.
 Worm    39 GSTTALECEPYTSSN-----VTWYRDKHVIATVE-------GHKNAILNE-RKPR-----GGEER 85

Human    99 DASI---TIDQLTMADNGTYEC--------------SVSLMSDLEGNTKSRVRLLVLVPPSKPEC 146
            ...|   .|..:...|.|.|.|              .::.:.::..|.|      :.:.|:.|  
 Worm    86 IPEIGFLVIFDVQKEDEGNYYCQRENDSKWGEVFQLKIAYVDEISQNEK------IKLEPNVP-- 142

Human   147 GIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPAS------GQPVSLKNISTDT 205
                  .:|.::.|.|...:..|.|:.:|...::     |::..:|      ...:.:.:.|...
 Worm   143 ------TLGRSLVLHCPIPKAYPPPKVTWTVNSL-----PISHISSDYVAFPNGTLIISHFSYHH 196

Human   206 SGYYICTSSNEEGTQFCNITVAVRSPSMNV-------------ALYVGIAVGVVAALIIIG-III 256
            .||:.|..:|..|....|..:..|....|:             ||...:.:.::..||..| ::|
 Worm   197 FGYFECNINNFAGHASTNTFIDSRELVANLESLKPTFVNGCSAALRSSLFMFLLGCLITSGAVLI 261

Human   257 Y--CCCCRGKDDNTEDKEDARPNR 278
            |  |..|..|        ..||.|
 Worm   262 YLICAVCLLK--------PGRPRR 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPA33NP_005805.1 V-set 26..138 CDD:462230 24/120 (20%)
IG_like 155..228 CDD:214653 15/78 (19%)
Ig strand B 158..162 CDD:409275 1/3 (33%)
Ig strand C 172..176 CDD:409275 0/3 (0%)
Ig strand E 194..198 CDD:409275 0/3 (0%)
Ig strand F 208..213 CDD:409275 2/4 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..319 3/12 (25%)
zig-10NP_001122644.1 IG_like 31..118 CDD:214653 22/96 (23%)
Ig strand B 42..46 CDD:409353 1/3 (33%)
Ig strand C 53..57 CDD:409353 0/8 (0%)
Ig strand E 91..94 CDD:409353 0/2 (0%)
Ig strand F 104..109 CDD:409353 2/4 (50%)
Ig_3 134..206 CDD:464046 15/90 (17%)

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