DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRIB1 and trib1

DIOPT Version :10

Sequence 1:NP_079471.1 Gene:TRIB1 / 10221 HGNCID:16891 Length:372 Species:Homo sapiens
Sequence 2:XP_002938707.2 Gene:trib1 / 100497021 XenbaseID:XB-GENE-956608 Length:358 Species:Xenopus tropicalis


Alignment Length:374 Identity:245/374 - (65%)
Similarity:288/374 - (77%) Gaps:33/374 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     2 RVGPVRSAMSGASQPRGPALLFPATRGVPAKRLLDADDAAAVAAKCPRLSECSSPPD--YLSPPG 64
            |:|.:|.|...||..|                 |::|:.   .||||||:|  ||||  :|..||
 Frog    15 RLGALRLAACRASSKR-----------------LESDEP---PAKCPRLTE--SPPDSGFLPSPG 57

Human    65 SPCSPQPPPAAPGAGGGSGSAP-GPSRIADYLLLPLAEREHVSRALCIHTGRELRCKVFPIKHYQ 128
            |     |.||:|   .|:.|.| ||:.|.:|||||..:||||.|||.:||||||:||:||:||||
 Frog    58 S-----PQPASP---HGTSSHPQGPTCIGNYLLLPTGDREHVCRALNLHTGRELQCKIFPLKHYQ 114

Human   129 DKIRPYIQLPSHSNITGIVEVILGETKAYVFFEKDFGDMHSYVRSRKRLREEEAARLFKQIVSAV 193
            .||..|..||.|.||.||||||.|::|||||||||||||||||||.|||.|.||||||:||::||
 Frog   115 KKIESYTHLPWHPNIMGIVEVIQGDSKAYVFFEKDFGDMHSYVRSCKRLGEGEAARLFRQIINAV 179

Human   194 AHCHQSAIVLGDLKLRKFVFSTEERTQLRLESLEDTHIMKGEDDALSDKHGCPAYVSPEILNTTG 258
            :|||:|:::|||||||||||:.:||||||||||||.||||..||:||||||||||||||||||||
 Frog   180 SHCHRSSVILGDLKLRKFVFADKERTQLRLESLEDAHIMKENDDSLSDKHGCPAYVSPEILNTTG 244

Human   259 TYSGKAADVWSLGVMLYTLLVGRYPFHDSDPSALFSKIRRGQFCIPEHISPKARCLIRSLLRREP 323
            ||||::||||||||||||||||||||||||||||||||||||:|||:|:|||||||||||||:||
 Frog   245 TYSGRSADVWSLGVMLYTLLVGRYPFHDSDPSALFSKIRRGQYCIPDHVSPKARCLIRSLLRKEP 309

Human   324 SERLTAPEILLHPWFESVLEPGYIDSEIGTSDQIVPEYQEDSDISSFFC 372
            ||||||.|||||||||:...||..|.:..::||:||:..::.|....||
 Frog   310 SERLTAEEILLHPWFEAASNPGCADQDTSSNDQLVPDVPQNCDDIDSFC 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRIB1NP_079471.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/20 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..86 15/35 (43%)
PK_TRB1 97..338 CDD:270925 195/240 (81%)
COP1-binding. /evidence=ECO:0000250|UniProtKB:Q8K4K4 355..360 3/4 (75%)
trib1XP_002938707.2 Protein Kinases, catalytic domain 83..324 CDD:473864 195/240 (81%)

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