DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDF11 and Actbeta

DIOPT Version :10

Sequence 1:NP_005802.1 Gene:GDF11 / 10220 HGNCID:4216 Length:407 Species:Homo sapiens
Sequence 2:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster


Alignment Length:617 Identity:121/617 - (19%)
Similarity:182/617 - (29%) Gaps:281/617 - (45%)


- Green bases have known domain annotations that are detailed below.


Human    46 ERSSRPAPSVAPEPDGCPVCVWRQHSRELRLESIKSQILSKLRLKEAPNISREVVKQLLPKAPPL 110
            :::::|..::||             |.|:||||||.|||:||.|...||:|..:.||.:.:.   
  Fly   354 KKTNQPHNNIAP-------------SDEVRLESIKRQILTKLGLSHKPNVSHPLPKQFIWET--- 402

Human   111 QQILDLHDFQGDALQPEDFLEEDEYHATTETV-------------------ISMAQETDPAVQTD 156
                 ::...|..:.|.:.......:...:|:                   .....|.||:....
  Fly   403 -----IYRVDGGRMIPNNAFGSSGKNLDQKTIKLRAFASPGSHLFNGRGGRTDQRSERDPSHHKY 462

Human   157 GSPLCCHFHFSPKVMFTKVLKAQL-------------WVYLRPVPRPATVYLQILRLK------- 201
            .||....|:.|...::.|||:.:.             |...|.:...:.:....:.||       
  Fly   463 RSPFDFTFNISKNNVYGKVLRNRSLERIDKKNSFLNGWTENRQLKINSQIASMPIELKSHHNSSP 527

Human   202 -----------------------------PL-----TGEGTAGGGGG------------------ 214
                                         |:     ....|..|..|                  
  Fly   528 KELKSGAVRKVNGINGTQMNENALKKSTYPIDINHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTH 592

Human   215 -------GRRHIRIRSL--KIELHSRSGHWQSI----------DF----KQVL------------ 244
                   ||..|..:..  .||..::.||.:|.          ||    ::::            
  Fly   593 DKNRYHEGRSSIGYQPAIHNIEYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQY 657

Human   245 -------------------------------HS-WFRQPQS-----------NWG-------IEI 259
                                           || |..:.:|           .||       |:|
  Fly   658 RILEFSAQNRRVPSQKLSIRSAQIHIRIDKPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKI 722

Human   260 NAFDPS--------GTDLAV------------------------------------------TSL 274
            ..|..|        |.|.|:                                          |..
  Fly   723 WVFQLSTSINITEKGIDKAIIFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLLIDCTGC 787

Human   275 GPGAEGLH---------------------PFMELRVLENTKRSRRNLGLDCDEHSSESRCCRYPL 318
            | |...||                     ||:.|....:..|..|...:||. .:...:||:...
  Fly   788 G-GRYSLHLFQTSKLRGNSSDYLSTNPNRPFLVLHTESSRTRRVRRRAVDCG-GALNGQCCKESF 850

Human   319 TVDFEAFGW-DWIIAPKRYKANYCSGQCEYMF-----MQKYPHTHLVQQANPRG---SAGPCCTP 374
            .|.|:|.|| ||||||:.|.||||.|.|...|     .|.: |.|.:::....|   ...|||.|
  Fly   851 YVSFKALGWDDWIIAPRGYFANYCRGDCTGSFRTPDTFQTF-HAHFIEEYRKMGLMNGMRPCCAP 914

Human   375 TKMSPINMLYFNDKQQIIYGKIPGMVVDRCGC 406
            .|.|.::::|:.| ..||...:|.||||.|||
  Fly   915 IKFSSMSLIYYGD-DGIIKRDLPKMVVDECGC 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDF11NP_005802.1 TGFb_propeptide 61..285 CDD:480997 69/470 (15%)
TGF_beta_GDF8 301..407 CDD:381658 45/115 (39%)
ActbetaNP_651942.2 TGF_beta_INHB 845..945 CDD:381630 41/101 (41%)

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