DRSC/TRiP Functional Genomics Resources

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Protein Alignment GDF11 and mav

DIOPT Version :10

Sequence 1:NP_005802.1 Gene:GDF11 / 10220 HGNCID:4216 Length:407 Species:Homo sapiens
Sequence 2:NP_524626.1 Gene:mav / 43804 FlyBaseID:FBgn0039914 Length:701 Species:Drosophila melanogaster


Alignment Length:252 Identity:62/252 - (24%)
Similarity:94/252 - (37%) Gaps:69/252 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   217 RHIRIRSLKIEL------HSRSGHWQSIDFKQVLHSWFRQPQSNWGIEINA-------------F 262
            |..:|.|.|||.      .:|: .|...|..:.:.||..:...|.||||..             |
  Fly   458 RRRKITSRKIEFGNVGFQETRT-QWIEFDVTKAVRSWLNKSHENLGIEIQCDKCKSIGARILSDF 521

Human   263 DPS------------------------GTDLAVTSLGPGAEGLHPFMELRVLENTK-------RS 296
            .||                        ||   :.|...|...:|..|    |.|.:       ||
  Fly   522 SPSTPPRSTASSDEHLNLMPVLNIIGHGT---LNSQQHGDADIHQIM----LTNNRSDQYVHHRS 579

Human   297 RRNLGLDCDE-----HSSESRCCRYPLTVDFEAF-GWDWIIAPKRYKANYCSGQCEYMFMQKYPH 355
            ..:.....|:     :....||||..|.|.|::. |:::|:.||.:.|.||.|:|.......:.|
  Fly   580 NHDSTWRKDKWTNNCYKLHQRCCRNQLDVAFKSIKGFEFILQPKVFDAGYCHGRCPPRHNPAHHH 644

Human   356 T---HLVQQANPRGSAGPCCTPTKMSPINMLYF--NDKQQIIYGKIPGMVVDRCGCS 407
            .   .|:.|.:.:.:..|||||:|:..:.:|:.  |...::.......|.|..|.||
  Fly   645 ALLQSLIWQEDHKRAPRPCCTPSKLEMLEILHVDENHSDKLKISTWSDMQVVECACS 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GDF11NP_005802.1 TGFb_propeptide 61..285 CDD:480997 24/110 (22%)
TGF_beta_GDF8 301..407 CDD:381658 31/116 (27%)
mavNP_524626.1 TGFb_propeptide <438..518 CDD:480997 16/60 (27%)
TGF_beta_maverick 598..700 CDD:381633 30/101 (30%)

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