DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDK7 and KIN28

DIOPT Version :9

Sequence 1:NP_001790.1 Gene:CDK7 / 1022 HGNCID:1778 Length:346 Species:Homo sapiens
Sequence 2:NP_010175.1 Gene:KIN28 / 851450 SGDID:S000002266 Length:306 Species:Saccharomyces cerevisiae


Alignment Length:296 Identity:143/296 - (48%)
Similarity:199/296 - (67%) Gaps:10/296 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
            |.|...:|||.:|.||.....:|.:.:|||:||   .||.|||::.:|:||:|.|||:.|||:|.
Yeast     7 YTKEKKVGEGTYAVVYLGCQHSTGRKIAIKEIK---TSEFKDGLDMSAIREVKYLQEMQHPNVIE 68

Human    77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPN 141
            |:|.|....|::||.:|:.|||||:|||.|::.||:.|||:|||||:|:.:.|:::|||||||||
Yeast    69 LIDIFMAYDNLNLVLEFLPTDLEVVIKDKSILFTPADIKAWMLMTLRGVYHCHRNFILHRDLKPN 133

Human   142 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
            |||...:|.:|:||||||::..:|:...|..|||||||||||||||:.|...:|:|:||.|.|||
Yeast   134 NLLFSPDGQIKVADFGLARAIPAPHEILTSNVVTRWYRAPELLFGAKHYTSAIDIWSVGVIFAEL 198

Human   207 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIP-----LHHIFSAAGD 266
            :||:|:|||.:|:||:...|..|||||:..||::.|...|...:.:|  |     |...|.||.:
Yeast   199 MLRIPYLPGQNDVDQMEVTFRALGTPTDRDWPEVSSFMTYNKLQIYP--PPSRDELRKRFIAASE 261

Human   267 DLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT 302
            ..||.:.|:...||..|.||.|.|:..||...|.|:
Yeast   262 YALDFMCGMLTMNPQKRWTAVQCLESDYFKELPPPS 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK7NP_001790.1 STKc_CDK7 11..308 CDD:270833 143/296 (48%)
KIN28NP_010175.1 STKc_CDK7 7..302 CDD:270833 143/296 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C159046519
Domainoid 1 1.000 278 1.000 Domainoid score I299
eggNOG 1 0.900 - - E1_KOG0659
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1363
Inparanoid 1 1.050 284 1.000 Inparanoid score I630
Isobase 1 0.950 - 0 Normalized mean entropy S506
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003675
OrthoInspector 1 1.000 - - oto144782
orthoMCL 1 0.900 - - OOG6_103547
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R249
SonicParanoid 1 1.000 - - X2548
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.730

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