DRSC/TRiP Functional Genomics Resources

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Protein Alignment CTDSPL and ttm2

DIOPT Version :9

Sequence 1:XP_016861008.1 Gene:CTDSPL / 10217 HGNCID:16890 Length:297 Species:Homo sapiens
Sequence 2:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster


Alignment Length:193 Identity:61/193 - (31%)
Similarity:92/193 - (47%) Gaps:28/193 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    81 QRQVIPIP-SPPAKYLLPEVTVLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVY 144
            :::::|.| .||  |:.|..|        :|:::.:.|||..:...:...|              
  Fly   193 RKKLLPDPLQPP--YVQPPYT--------LVLEIKDVLVHPDWTYETGWRF-------------- 233

Human   145 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLS 209
             .|||.||.||:...:.||.|::||.......|:.|.||..|....||.|:|..|..|::||:|.
  Fly   234 -KKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLD 297

Human   210 RLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFE--GLSREDDVYSML 270
            .|.|:|.:|::||....|..|||.|:..:..|..:..||.|.:|..|..  |.|..|||..:|
  Fly   298 NLNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTDSPLXP_016861008.1 HIF-SF_euk 106..265 CDD:274055 50/160 (31%)
ttm2NP_612023.1 CPDc 208..336 CDD:214729 45/150 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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