DRSC/TRiP Functional Genomics Resources

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Protein Alignment PATJ and GUK1

DIOPT Version :9

Sequence 1:XP_011538764.1 Gene:PATJ / 10207 HGNCID:28881 Length:1937 Species:Homo sapiens
Sequence 2:NP_010742.1 Gene:GUK1 / 852065 SGDID:S000002862 Length:187 Species:Saccharomyces cerevisiae


Alignment Length:142 Identity:30/142 - (21%)
Similarity:50/142 - (35%) Gaps:47/142 - (33%)


- Green bases have known domain annotations that are detailed below.


Human  1093 LKNGEELK---------GIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNA 1148
            :||.|.::         |..:..|.:.|.:|||..|          .:|:|..   ::|:||...
Yeast    63 IKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCIL----------DIDMQGV---KSVKAIPEL 114

Human  1149 GNPVVFIVQSLSSTPRVIPNVHNKANKITGNQNQDTQEKKEKRQGTAPPPM-------------- 1199
            ....:||..         |:|.:...::.| :..:|:|...||...|...:              
Yeast   115 NARFLFIAP---------PSVEDLKKRLEG-RGTETEESINKRLSAAQAELAYAETGAHDKVIVN 169

Human  1200 -KLPPPYKALTD 1210
             .|...||.|.|
Yeast   170 DDLDKAYKELKD 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PATJXP_011538764.1 L27_2 8..65 CDD:117611
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 246..325 CDD:238492
PDZ_signaling 366..450 CDD:238492
PDZ_signaling 570..634 CDD:238492
PDZ 683..772 CDD:214570
PDZ_signaling 1066..1157 CDD:238492 17/72 (24%)
PDZ 1236..1321 CDD:214570
PDZ 1459..1574 CDD:214570
PDZ_signaling 1586..1666 CDD:238492
PDZ_signaling 1729..1814 CDD:238492
PDZ_signaling 1852..1936 CDD:238492
GUK1NP_010742.1 guanyl_kin 3..185 CDD:213788 30/142 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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