DRSC/TRiP Functional Genomics Resources

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Protein Alignment CALCRL and calcrl

DIOPT Version :10

Sequence 1:XP_005246289.2 Gene:CALCRL / 10203 HGNCID:16709 Length:472 Species:Homo sapiens
Sequence 2:XP_012825895.1 Gene:calcrl / 549647 XenbaseID:XB-GENE-5736126 Length:481 Species:Xenopus tropicalis


Alignment Length:479 Identity:375/479 - (78%)
Similarity:418/479 - (87%) Gaps:9/479 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLYSIFHFGLMMEKKCTLYFLVLLPFFMI--LVTAELEESP----EDSIQLGVTRNKIMTAQYEC 59
            ::...|..||::......|.:::|....:  .|.||.|:..    |:.||:||||||||||||||
 Frog     3 LIIETFEMGLLLRSALFKYIIIVLIMLNLRGYVLAEQEQGSQIPLEEIIQVGVTRNKIMTAQYEC 67

Human    60 YQKIMQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFR 124
            ||||||:|....||.:|||||||||||.||:||..|.|.||||||||||||||||.|.::|:|||
 Frog    68 YQKIMQEPANGKEGHFCNRTWDGWLCWGDVSAGVISEQRCPDYFQDFDPSEKVTKECGKNGHWFR 132

Human   125 HPASNRTWTNYTQCNVNTHEKVKTALNLFYLTIIGHGLSIASLLISLGIFFYFKSLSCQRITLHK 189
            ||.|||||||||:||..|||||||||||:|||||||||||||||||||||||||:||||||||||
 Frog   133 HPDSNRTWTNYTRCNTFTHEKVKTALNLYYLTIIGHGLSIASLLISLGIFFYFKNLSCQRITLHK 197

Human   190 NLFFSFVCNSVVTIIHLTAVANNQALVATNPVSCKVSQFIHLYLMGCNYFWMLCEGIYLHTLIVV 254
            ||||||||||::|||.|:|||||||||||||||||:|||||||||||||||||||||||||||||
 Frog   198 NLFFSFVCNSIITIISLSAVANNQALVATNPVSCKISQFIHLYLMGCNYFWMLCEGIYLHTLIVV 262

Human   255 AVFAEKQHLMWYYFLGWGFPLIPACIHAIARSLYYNDNCWISSDTHLLYIIHGPICAALLVNLFF 319
            |||||||||||||.||||||||||||||:||||||||||||||:|||||||||||||||||||||
 Frog   263 AVFAEKQHLMWYYLLGWGFPLIPACIHAVARSLYYNDNCWISSETHLLYIIHGPICAALLVNLFF 327

Human   320 LLNIVRVLITKLKVTHQAESNLYMKAVRATLILVPLLGIEFVLIPWRPEGKIAEEVYDYIMHILM 384
            |||||||||||||||||||||||||||||||||||||||||||.||:|||:||||:|||:|||||
 Frog   328 LLNIVRVLITKLKVTHQAESNLYMKAVRATLILVPLLGIEFVLFPWKPEGRIAEEIYDYVMHILM 392

Human   385 HFQGLLVSTIFCFFNGEVQAILRRNWNQYKIQFGNSFSNSEALRSASYTVSTISD--GPGYSHDC 447
            |:|||||:||||||||||||:|:|:|||||||||:||::||.|||||||||:||:  |..|:||.
 Frog   393 HYQGLLVATIFCFFNGEVQAVLKRHWNQYKIQFGSSFAHSEGLRSASYTVSSISEIQGTTYTHDY 457

Human   448 PSEHLNGKSIHDIENVLLKPENLY 471
             ||..|||:.||:|||..|.|..|
 Frog   458 -SEQSNGKNCHDMENVFFKTEKQY 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CALCRLXP_005246289.2 HRM 73..141 CDD:397086 52/67 (78%)
7tmB1_calcitonin_R 149..422 CDD:341343 251/272 (92%)
TM helix 1 151..176 CDD:341343 23/24 (96%)
TM helix 2 185..207 CDD:341343 18/21 (86%)
TM helix 3 224..251 CDD:341343 25/26 (96%)
TM helix 4 263..283 CDD:341343 18/19 (95%)
TM helix 5 298..327 CDD:341343 27/28 (96%)
TM helix 6 341..368 CDD:341343 24/26 (92%)
TM helix 7 374..399 CDD:341343 20/24 (83%)
calcrlXP_012825895.1 HRM 81..149 CDD:397086 52/67 (78%)
7tmB1_calcitonin_R 157..429 CDD:341343 250/271 (92%)
TM helix 1 159..184 CDD:341343 23/24 (96%)
TM helix 2 193..215 CDD:341343 18/21 (86%)
TM helix 3 232..259 CDD:341343 25/26 (96%)
TM helix 4 271..291 CDD:341343 18/19 (95%)
TM helix 5 306..335 CDD:341343 27/28 (96%)
TM helix 6 349..376 CDD:341343 24/26 (92%)
TM helix 7 382..407 CDD:341343 20/24 (83%)

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