DRSC/TRiP Functional Genomics Resources

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Protein Alignment CALCRL and Calcrl

DIOPT Version :10

Sequence 1:XP_005246289.2 Gene:CALCRL / 10203 HGNCID:16709 Length:472 Species:Homo sapiens
Sequence 2:XP_006234501.1 Gene:Calcrl / 25029 RGDID:2255 Length:464 Species:Rattus norvegicus


Alignment Length:462 Identity:419/462 - (90%)
Similarity:435/462 - (94%) Gaps:1/462 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    11 MMEKKCTLYFLVLLPFFMILVTAELEESPEDSIQLGVTRNKIMTAQYECYQKIMQDPIQQAEGVY 75
            ||:|||||.||.||...|.|:.||.||....: .||||||||||||||||||||||||||.||:|
  Rat     1 MMDKKCTLCFLFLLLLNMALIAAESEEGANQT-DLGVTRNKIMTAQYECYQKIMQDPIQQGEGLY 64

Human    76 CNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCNV 140
            ||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||.||.
  Rat    65 CNRTWDGWLCWNDVAAGTESMQYCPDYFQDFDPSEKVTKICDQDGNWFRHPDSNRTWTNYTLCNN 129

Human   141 NTHEKVKTALNLFYLTIIGHGLSIASLLISLGIFFYFKSLSCQRITLHKNLFFSFVCNSVVTIIH 205
            :||||||||||||||||||||||||||:|||.|||||||||||||||||||||||||||:|||||
  Rat   130 STHEKVKTALNLFYLTIIGHGLSIASLIISLIIFFYFKSLSCQRITLHKNLFFSFVCNSIVTIIH 194

Human   206 LTAVANNQALVATNPVSCKVSQFIHLYLMGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLG 270
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   195 LTAVANNQALVATNPVSCKVSQFIHLYLMGCNYFWMLCEGIYLHTLIVVAVFAEKQHLMWYYFLG 259

Human   271 WGFPLIPACIHAIARSLYYNDNCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTH 335
            |||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   260 WGFPLLPACIHAIARSLYYNDNCWISSDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTH 324

Human   336 QAESNLYMKAVRATLILVPLLGIEFVLIPWRPEGKIAEEVYDYIMHILMHFQGLLVSTIFCFFNG 400
            |||||||||||||||||||||||||||.|||||||:|||||||:||||||:||||||||||||||
  Rat   325 QAESNLYMKAVRATLILVPLLGIEFVLFPWRPEGKVAEEVYDYVMHILMHYQGLLVSTIFCFFNG 389

Human   401 EVQAILRRNWNQYKIQFGNSFSNSEALRSASYTVSTISDGPGYSHDCPSEHLNGKSIHDIENVLL 465
            |||||||||||||||||||.||:|:||||||||||||||..|||||||:||||||||.|||||.|
  Rat   390 EVQAILRRNWNQYKIQFGNGFSHSDALRSASYTVSTISDVQGYSHDCPTEHLNGKSIQDIENVAL 454

Human   466 KPENLYN 472
            |||.:|:
  Rat   455 KPEKMYD 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CALCRLXP_005246289.2 HRM 73..141 CDD:397086 63/67 (94%)
7tmB1_calcitonin_R 149..422 CDD:341343 263/272 (97%)
TM helix 1 151..176 CDD:341343 22/24 (92%)
TM helix 2 185..207 CDD:341343 20/21 (95%)
TM helix 3 224..251 CDD:341343 26/26 (100%)
TM helix 4 263..283 CDD:341343 18/19 (95%)
TM helix 5 298..327 CDD:341343 28/28 (100%)
TM helix 6 341..368 CDD:341343 25/26 (96%)
TM helix 7 374..399 CDD:341343 22/24 (92%)
CalcrlXP_006234501.1 HRM 62..129 CDD:397086 62/66 (94%)
7tmB1_calcitonin_R 138..411 CDD:341343 263/272 (97%)
TM helix 1 140..165 CDD:341343 22/24 (92%)
TM helix 2 174..196 CDD:341343 20/21 (95%)
TM helix 3 213..240 CDD:341343 26/26 (100%)
TM helix 4 252..272 CDD:341343 18/19 (95%)
TM helix 5 287..316 CDD:341343 28/28 (100%)
TM helix 6 330..357 CDD:341343 25/26 (96%)
TM helix 7 363..388 CDD:341343 22/24 (92%)

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