DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDK5 and p38a

DIOPT Version :10

Sequence 1:NP_004926.1 Gene:CDK5 / 1020 HGNCID:1774 Length:292 Species:Homo sapiens
Sequence 2:NP_477163.1 Gene:p38a / 42866 FlyBaseID:FBgn0015765 Length:366 Species:Drosophila melanogaster


Alignment Length:307 Identity:107/307 - (34%)
Similarity:155/307 - (50%) Gaps:31/307 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
            |:.|:.:|.|.||.|.||..|.|:..||:|::..............||:.|||.:.|:|::.|.|
  Fly    25 YQDLQPVGSGAYGQVSKAVVRGTNMHVAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVIGLLD 89

Human    69 VLH---------SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
            :.|         :.:::.||....|.||.......:  |..:.|:..::|:|:||.:.||..|:|
  Fly    90 IFHPHPANGSLENFQQVYLVTHLMDADLNNIIRMQH--LSDDHVQFLVYQILRGLKYIHSAGVIH 152

Human   125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189
            |||||.|:.:|.:.||::.||||||.....:..|   |.|.|||.|:::.....|..::|:||.|
  Fly   153 RDLKPSNIAVNEDCELRILDFGLARPTENEMTGY---VATRWYRAPEIMLNWMHYDQTVDIWSVG 214

Human   190 CIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP---------TEEQWPSMTKLPDYKPYPMYPAT 245
            ||.|||... |.||||.|...||..|..:||||         :|.....:..||..|       .
  Fly   215 CIMAELITR-RTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLPPMK-------G 271

Human   246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
            .|..||....|....|||:.:|:.:..:||:|||||.|||...:..|
  Fly   272 RSFKNVFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK5NP_004926.1 STKc_CDK5 3..286 CDD:143344 105/299 (35%)
p38aNP_477163.1 STKc_p38 9..354 CDD:143356 107/307 (35%)

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