DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK5 and Pitslre

DIOPT Version :10

Sequence 1:NP_004926.1 Gene:CDK5 / 1020 HGNCID:1774 Length:292 Species:Homo sapiens
Sequence 2:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster


Alignment Length:304 Identity:125/304 - (41%)
Similarity:186/304 - (61%) Gaps:13/304 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
            :::::.|.:|.|||||.|::||::.|:|||||||::::.:.||.|.::||||..|.:.:|.|||.
  Fly   555 VEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREINTLLKGQHPNIVT 619

Human    66 LHDVLHSDK--KLTLVFEFCDQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSRNVLHR 125
            :.:::....  |:.:|.::.:.|||...::...   ...|..||....|||:.:...|...:|||
  Fly   620 VREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHR 684

Human   126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC 190
            |||..|||::..|.||:.||||||.:|.|::.|::.|||||||.|::|..:.:|||.||:||.||
  Fly   685 DLKTSNLLLSHKGILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGC 749

Human   191 IFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-------PYPMYPATTSL 248
            ||||.... .|||||....|:|.|||:.||||.|:.||..|:||..|       .:..||.:...
  Fly   750 IFAEFLQM-LPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLR 813

Human   249 VNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
            .:...|.:..|..|||.||..:|.||:||:.||:|.:|.:...|
  Fly   814 KHFQEKTSEMGLSLLQGLLTYDPKQRLSADAALKHGFFKELPLP 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK5NP_004926.1 STKc_CDK5 3..286 CDD:143344 123/294 (42%)
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 123/296 (42%)

Return to query results.
Submit another query.