DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDK5 and Cdk8

DIOPT Version :10

Sequence 1:NP_004926.1 Gene:CDK5 / 1020 HGNCID:1774 Length:292 Species:Homo sapiens
Sequence 2:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster


Alignment Length:326 Identity:124/326 - (38%)
Similarity:181/326 - (55%) Gaps:60/326 - (18%)


- Green bases have known domain annotations that are detailed below.


Human     9 KIGEGTYGTVFKAKNRETHE--IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL- 70
            |:|.||||.|:|||.:||.:  ..|||::    |..|:..||.|||.||:||||:|::.|..|. 
  Fly    26 KVGRGTYGHVYKAKWKETSDGKEYALKQI----DGTGLSMSACREIALLRELKHQNVITLIRVFL 86

Human    71 -HSDKKLTLVFEFCDQDL-------------KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
             |:|:|:.|:.::.:.||             ||......|     :|||.|:|:|.|:.:.||..
  Fly    87 SHNDRKVFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRG-----MVKSLLYQILDGIHYLHSNW 146

Human   122 VLHRDLKPQNLLI----NRNGELKLADFGLARAFGIPVRCYS---AEVVTLWYRPPDVLFGAKLY 179
            ||||||||.|:|:    |..|.:|:||.|.||.|..|::..:   ..|||.|||.|::|.||:.|
  Fly   147 VLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHY 211

Human   180 STSIDMWSAGCIFAELANAGRPLFPGNDVD---------DQLKRIFRLLGTPTEEQWPSMTKLP- 234
            :.:||:|:.|||||||..: .|:|.....|         |||.|||.::|.|.::.|..:.|:| 
  Fly   212 TKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIKKMPE 275

Human   235 ------DYK--PYPMYPATTSLVNVVP----KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
                  |:|  .|    :|.||...:.    |.::....|||.||..:|.:||::|:|:|..||.
  Fly   276 HHTLTKDFKRSTY----STCSLAKYMERHKIKPDSKAFHLLQKLLLMDPNKRITSEQAMQDQYFQ 336

Human   288 D 288
            :
  Fly   337 E 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK5NP_004926.1 STKc_CDK5 3..286 CDD:143344 122/322 (38%)
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 122/322 (38%)

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