DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDK5 and p38b

DIOPT Version :10

Sequence 1:NP_004926.1 Gene:CDK5 / 1020 HGNCID:1774 Length:292 Species:Homo sapiens
Sequence 2:NP_477361.1 Gene:p38b / 34780 FlyBaseID:FBgn0024846 Length:365 Species:Drosophila melanogaster


Alignment Length:306 Identity:104/306 - (33%)
Similarity:160/306 - (52%) Gaps:25/306 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
            :.|:.|:.:|:|.||.|.||..|.|...||:|::..............||:.|||.:.|:|::.|
  Fly    22 ETYQNLQPVGQGAYGQVCKAVVRGTSTKVAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVIGL 86

Human    67 HDVLHSD---------KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
            .||.|..         :::.:|....|.||.....:  ..|..:.|:..::|:|:||.:.||..|
  Fly    87 LDVFHPGQPADSLDQFQQVYMVTHLMDADLNNIIRT--QKLSDDHVQFLVYQILRGLKYIHSAGV 149

Human   123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187
            :||||||.|:.:|.:.||::.||||||.....:..|   |.|.|||.|:::.....|:.:.|:||
  Fly   150 IHRDLKPSNIAVNEDCELRILDFGLARPAESEMTGY---VATRWYRAPEIMLNWMHYNQTADIWS 211

Human   188 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD------YKPYPMYPATT 246
            .|||.|||. .||.||||.|...||..|..:||||.:|   .|:::..      .:..|:.| ..
  Fly   212 VGCIMAELL-TGRTLFPGTDHIHQLNLIMEVLGTPADE---FMSRISSESARNYIRSLPVMP-RR 271

Human   247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
            :..::....|....|||:.:|:.:..:||:||:||.|||...:..|
  Fly   272 NFRDIFRGANPLAIDLLEKMLELDADKRITAEQALAHPYMEKYHDP 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK5NP_004926.1 STKc_CDK5 3..286 CDD:143344 102/297 (34%)
p38bNP_477361.1 STKc_p38 8..353 CDD:143356 104/306 (34%)

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