DRSC/TRiP Functional Genomics Resources

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Protein Alignment ALG3 and algn-3

DIOPT Version :10

Sequence 1:NP_005778.1 Gene:ALG3 / 10195 HGNCID:23056 Length:438 Species:Homo sapiens
Sequence 2:NP_001254418.1 Gene:algn-3 / 175065 WormBaseID:WBGene00010720 Length:634 Species:Caenorhabditis elegans


Alignment Length:390 Identity:191/390 - (48%)
Similarity:247/390 - (63%) Gaps:20/390 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    45 VAACLCLAEVGITFWVIHRVAYTEIDWKAYMAEVEGVIN-GTYDYTQLQGDTGPLVYPAGFVYIF 108
            |||.|.:||..::..||.:|.||||||..||.:||..:| |..:|||:.|||||.|||||.:::|
 Worm    23 VAALLMIAEAVLSHLVILKVNYTEIDWSTYMQQVECYVNKGILNYTQIGGDTGPCVYPAGHLFVF 87

Human   109 MGLYYATSRGTDIRMAQNIFAVLYLATLLLVFLIYHQTCKVPPFVFFFMCCASYRVHSIFVLRLF 173
            ..|::.||.|.:||.||:||...|:..|.:||.|.|:|.::||.|...:....||:|||||||||
 Worm    88 RLLHFFTSSGRNIRAAQHIFQGFYMFNLFMVFRILHKTMRIPPIVLLLVSITGYRIHSIFVLRLF 152

Human   174 NDPVAMVLLFLSINLLLAQRWGWGCCFFSLAVSVKMNVLLFAPGLLFLLLTQFGFRGALPKLGIC 238
            |||:||:|.:::::..|.|:|..||.|:|||||:|||||||||.|.|.||....:...|..|.:|
 Worm   153 NDPLAMMLFYVAMDRFLEQKWLVGCVFYSLAVSIKMNVLLFAPALFFTLLLNNSYMATLGYLTVC 217

Human   239 AGLQVVLGLPFLLENPSGYLSRSFDLGRQFLFHWTVNWRFLPEALFLHRAFHLALLTAHLTLLLL 303
            ..:|:.:|.||||.:...||.:||||||.|:|.||||||||||..||.:.||.|||..|||.|.:
 Worm   218 GLIQLYVGGPFLLYDWKSYLQQSFDLGRVFMFKWTVNWRFLPEEFFLDKRFHAALLVGHLTFLAV 282

Human   304 FALCRWHRTGESILSLLRDPSKRKVPPQPLTPNQIVSTLF---TSNFIGICFSRSLHYQFYVWYF 365
            ||...|.|.    |:.||.....::.....|....|.|.:   |||.|||.||||||||||.|||
 Worm   283 FASYMWFRR----LNGLRTSVYLRLFEGITTTTGAVETYYAFCTSNLIGIAFSRSLHYQFYSWYF 343

Human   366 HTLPYLLW----------AMPARWLTHLLRLLVLGLIELSWNTYPSTSCSSAALHICHAVILLQL 420
            |.:|:||:          .:|  |...|.::.:|..:|||||.||||..|||.||:||.:|...|
 Worm   344 HQIPFLLFCDYPHVASVSTIP--WRQFLWKVPLLAAVELSWNVYPSTWWSSALLHVCHVIIFWHL 406

Human   421  420
             Worm   407  406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALG3NP_005778.1 ALG3 49..406 CDD:461587 179/370 (48%)
algn-3NP_001254418.1 ALG3 25..392 CDD:461587 180/372 (48%)

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