DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF41 and elgi

DIOPT Version :10

Sequence 1:NP_005776.1 Gene:RNF41 / 10193 HGNCID:18401 Length:317 Species:Homo sapiens
Sequence 2:NP_648816.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster


Alignment Length:315 Identity:181/315 - (57%)
Similarity:248/315 - (78%) Gaps:0/315 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHL 65
            |||||.||||:|||:|.|||||||||:|:||..||||||..||.:|.::|.||||||:.:|.|:|
  Fly     1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQPTCPVDRNSLTTANL 65

Human    66 RPVPRIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELP 130
            |.||||:||:||:|.|.||||.:||:||::||...|||.:|.||||||..||:|||.::|||||.
  Fly    66 RAVPRILRNLLSRLSITCDNAPYGCTAVLKLDAYNSHLDECIHNPKRPFPCEKGCGFDIPKDELK 130

Human   131 NHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQNLEETIE 195
            :|||::.||:::.:|..::.||:....:.:..:.|.||::||.|.:|||:|..||.::.:.:.:|
  Fly   131 DHNCVRELRTLIVKQTEKMGELKSELTDQQLTINELKRELQLFKDFMRAMRVSNPAMRAIADQME 195

Human   196 YNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERSWPQGLA 260
            .:|::.|.::|..||||||||||||||..||.:|||:|.|||||..|::.|:|..|||.||:||:
  Fly   196 RDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHERRWPRGLS 260

Human   261 TLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVMIFAHGVE 315
            :|||||.|||.|:|||.:||||||||:|::|:|.||.:|::.:||||||||||:|
  Fly   261 SLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAHGIE 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF41NP_005776.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 27/41 (66%)
USP8_interact 137..315 CDD:430333 92/177 (52%)
elgiNP_648816.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 27/41 (66%)
USP8_interact 137..315 CDD:430333 92/177 (52%)

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