DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDK4 and cdk6

DIOPT Version :9

Sequence 1:NP_000066.1 Gene:CDK4 / 1019 HGNCID:1773 Length:303 Species:Homo sapiens
Sequence 2:XP_002934637.2 Gene:cdk6 / 100489734 XenbaseID:XB-GENE-985427 Length:333 Species:Xenopus tropicalis


Alignment Length:297 Identity:209/297 - (70%)
Similarity:245/297 - (82%) Gaps:4/297 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 64
            :|..:||.|||||.||||.|:|||| .:.|.|||||.|||..   |..|:|:||:||||:||.||
 Frog    10 LADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT---GEEGMPLSTIREVAVLRHLE 71

Human    65 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 129
            .|||||||||.|||..||||||.|:|||||||||||.|||||.|.||:|:|.|||:|.|.|||||
 Frog    72 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPDPGVPSEIIKDMMLQLLRGLD 136

Human   130 FLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATP 194
            |||::.:|||||||:||||||.|.:||||||||||||:|||||.||||||||||||||||:||||
 Frog   137 FLHSHRVVHRDLKPQNILVTSNGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATP 201

Human   195 VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS 259
            ||:|||||||||||||||||.|||:.||||||||:||||.|::||.||::||.||..|.|:|:::
 Frog   202 VDLWSVGCIFAEMFRRKPLFRGNSDVDQLGKIFDVIGLPEEEEWPHDVAVPRNAFHFRQPQPIEN 266

Human   260 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 296
            |||.::|.|..||::.|||:|..||||:.||.|.|.|
 Frog   267 VVPGIDEQGKDLLIKCLTFSPANRISAYSALSHPYFH 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK4NP_000066.1 PKc_like 5..295 CDD:389743 206/290 (71%)
Required for binding D-type cyclins 50..56 3/5 (60%)
cdk6XP_002934637.2 STKc_CDK6 13..302 CDD:270846 206/291 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D187506at32523
OrthoFinder 1 1.000 - - FOG0004605
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2222
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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