DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDK3 and CDC28

DIOPT Version :9

Sequence 1:NP_001249.1 Gene:CDK3 / 1018 HGNCID:1772 Length:305 Species:Homo sapiens
Sequence 2:NP_009718.3 Gene:CDC28 / 852457 SGDID:S000000364 Length:298 Species:Saccharomyces cerevisiae


Alignment Length:288 Identity:187/288 - (64%)
Similarity:231/288 - (80%) Gaps:5/288 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     4 FQKVEKIGEGTYGVVYKAKNRETGQ---LVALKKIRLDLEMEGVPSTAIREISLLKELKHPNIVR 65
            ::::||:|||||||||||.:...||   :||||||||:.|.||||||||||||||||||..||||
Yeast     8 YKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVR 72

Human    66 LLDVVHNE-RKLYLVFEFLSQDLKKYMDSTPGSE-LPLHLIKSYLFQLLQGVSFCHSHRVIHRDL 128
            |.|:||:: .|||||||||..|||:||:..|..: |...::|.::.||.:|:::|||||::||||
Yeast    73 LYDIVHSDAHKLYLVFEFLDLDLKRYMEGIPKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDL 137

Human   129 KPQNLLINELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIF 193
            ||||||||:.|.:||.|||||||||||||.||||:|||||||||:|||.|.|:|.||.|||||||
Yeast   138 KPQNLLINKDGNLKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIF 202

Human   194 AEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTWPGVTQLPDYKGSFPKWTRKGLEEIVPNLEPE 258
            |||..||.:|.|||||||:|:|||:||||:|..||.:..|||:|.|||:|.||.|.::||:|:|.
Yeast   203 AEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRKDLSQVVPSLDPR 267

Human   259 GRDLLMQLLQYDPSQRITAKTALAHPYF 286
            |.|||.:||.|||..||:|:.|..||||
Yeast   268 GIDLLDKLLAYDPINRISARRAAIHPYF 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK3NP_001249.1 PLN00009 1..293 CDD:177649 187/288 (65%)
STKc_CDK2_3 3..286 CDD:270844 185/286 (65%)
CDC28NP_009718.3 STKc_CDK1_CdkB_like 8..295 CDD:270829 185/286 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C159051537
Domainoid 1 1.000 387 1.000 Domainoid score I115
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 387 1.000 Inparanoid score I384
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000411
OrthoInspector 1 1.000 - - otm52745
orthoMCL 1 0.900 - - OOG6_100334
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X960
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.750

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