DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM7 and SC35

DIOPT Version :10

Sequence 1:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens
Sequence 2:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster


Alignment Length:187 Identity:53/187 - (28%)
Similarity:78/187 - (41%) Gaps:31/187 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    11 TLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAMNLLNGIK 74
            :|.|.||..:.|.|.|..:|.:.|.|..:.||:|: ..:.:.||||.|..:.....|:..::|..
  Fly    24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRM 88

Human    75 LYGRPIKIQF-RSGSSHAPQDVSLSYPQHHVGNSS-----PTSTSPSSRYERTMDNMTSSAQIIQ 133
            |.||.:::|. |.|...:|...|........|..|     ..|.||..|..|:..         :
  Fly    89 LDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPR---------R 144

Human   134 RSFS--------SPENFQRQAVMNSALRQMSYGGKFGSSPLDQSGFSPSV-QSHSHS 181
            ||:|        |||  :|.....|.:|..|..| .||.   ..|.:|:. :|.|.|
  Fly   145 RSYSRSRSPGSHSPE--RRSKFSRSPVRGDSRNG-IGSG---SGGLAPAASRSRSRS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005 23/72 (32%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35 2/9 (22%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76 2/16 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 6/20 (30%)
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 23/71 (32%)

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