DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM7 and Rb97D

DIOPT Version :10

Sequence 1:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens
Sequence 2:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster


Alignment Length:233 Identity:60/233 - (25%)
Similarity:86/233 - (36%) Gaps:60/233 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYA-MNLLNG 72
            :.||||.|:....||.|.|.|.|.|.|:.||:..|| .||.:.||||.|....:|..| :...:.
  Fly   123 KKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHA 187

Human    73 IK---------LYGRPIKIQFRSGSSHAPQDVSLSYPQHHVGNSS--PTST--SPSSR------- 117
            ||         :|....|.:.:.|........||:..|...|...  |...  :||.|       
  Fly   188 IKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQ 252

Human   118 ----YERTMDNMTSSAQIIQRSFSSPENFQRQAVMNSAL---------RQMSYGGKFGSSPLDQS 169
                |::.......||        .|.||........|:         :||:..|.:  .|..|:
  Fly   253 AMGPYQQQPPPAPMSA--------PPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPY--PPPQQN 307

Human   170 GFS------PSVQSHSHSFNQSSSSQWRQGTPSSQRKV 201
            |::      |..|       |..::||  |.|...::|
  Fly   308 GWNAPPPPPPGAQ-------QWHANQW--GCPPPVQQV 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005 30/83 (36%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35 4/9 (44%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76 4/26 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 11/45 (24%)
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 28/71 (39%)
RRM_SF 33..110 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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