DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM7 and Rox8

DIOPT Version :10

Sequence 1:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens
Sequence 2:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster


Alignment Length:217 Identity:53/217 - (24%)
Similarity:93/217 - (42%) Gaps:46/217 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    10 RTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIK 74
            :||:||||::.|:|:||..||...|||...||.::....|  :||:.:.:..:...|:..:|...
  Fly     7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDP--YAFIEYSNYQAATTALTAMNKRL 69

Human    75 LYGRPIKIQFRSGSSHAPQ-DVSLSYPQHH--VGNSSPTSTSPSSRYERTMDNMTSSAQIIQRSF 136
            ...:.||:.:.:...:.|: |:|   ..||  ||:.||...:.:.|.........|:.:|::...
  Fly    70 FLEKEIKVNWATSPGNQPKTDIS---SHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPH 131

Human   137 SSPE------NFQRQAVMNSALRQMS-----------------------------YGGKFGSSPL 166
            :...      :|.::|...:|::.|:                             .||..|..|.
  Fly   132 TMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPG 196

Human   167 DQSGFSPSVQSHSHS--FNQSS 186
            :.||...| |.|:..  :||||
  Fly   197 NGSGVKGS-QRHTFEEVYNQSS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005 24/72 (33%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35 4/9 (44%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76 2/16 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 10/26 (38%)
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788 23/72 (32%)
RRM2_TIA1_like 96..170 CDD:409789 12/73 (16%)
RRM_SF 221..292 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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