DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RBM7 and tra2

DIOPT Version :10

Sequence 1:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens
Sequence 2:NP_476764.1 Gene:tra2 / 36619 FlyBaseID:FBgn0003742 Length:264 Species:Drosophila melanogaster


Alignment Length:308 Identity:61/308 - (19%)
Similarity:101/308 - (32%) Gaps:108/308 - (35%)


- Green bases have known domain annotations that are detailed below.


Human   129 RRERRE-----QAAAAPFPSPAPASPAISVIGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRY 188
            ||.|:.     :....||..|...|..:: ||.|          |.::...::::..||.:|.| 
  Fly    19 RRTRKRLYELAERIPGPFDYPLIGSMLLT-IGKS----------PLELVTHLMELMHHLPSPMR- 71

Human   189 HLQQARRQQVKQYLSTTLGPKLASQALTPPPGPSSAQP-LPAPETAH----------ATGPTG-- 240
                           ..|||.|    |.....|...|. |.:|:...          :.|..|  
  Fly    72 ---------------AWLGPFL----LVVVDRPEMVQDVLSSPDCVQKPFMYDFFRLSKGLFGAP 117

Human   241 -----------SAPNSPMALL----TIGSSSE---KEL--PVSGNLLDVYSSQGVATPAITVSNS 285
                       :|..||.||.    |:.:.::   :||  .|||...||:......|.....|.:
  Fly   118 ADQWKRHRKLLNASFSPAALKSFVPTLNAKADQFTRELAGKVSGECFDVHKLLARYTLVTISSTT 182

Human   286 CPAELPNIKREISET---------------------------EAKALLKERQ------KKDNHNL 317
            ..|:|...|||:.|.                           ...|..:|.:      |:.:..:
  Fly   183 LGADLSVEKREVLEEYTSNAIQMFTNCFERIYKAWLHPDCVYRMTAAFREEEVRFKSFKQMSRKI 247

Human   318 IERRRRFNINDRIKELGTLIPKSNDPEMRWNKGTILKASVDYIRKLQK 365
            |..|:.  :....|:..|...:.:|||   ....:.||.: :|.:|::
  Fly   248 ITMRQA--LLSETKQTKTEYQQDSDPE---ENQELPKAKI-FIERLEE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 27/136 (20%)
tra2NP_476764.1 RRM_TRA2 96..175 CDD:409798 15/78 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.