DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM7 and CG12288

DIOPT Version :10

Sequence 1:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens
Sequence 2:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster


Alignment Length:36 Identity:12/36 - (33%)
Similarity:15/36 - (41%) Gaps:6/36 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    26 LEERRPAESAQLLSL------NSLLPESGIVADIEL 55
            ||.|.|.|..|...|      :..|.|:..:..|||
  Fly     4 LEYRLPLEFIQKKVLHVTIWSHDSLQENAFLGGIEL 39

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005 12/36 (33%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35 5/8 (63%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828
RRM_SF 261..332 CDD:473069
Blue background indicates that the domain is not in the aligned region.

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