DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM7 and Ref2

DIOPT Version :10

Sequence 1:NP_001272974.1 Gene:RBM7 / 10179 HGNCID:9904 Length:267 Species:Homo sapiens
Sequence 2:NP_609574.1 Gene:Ref2 / 34667 FlyBaseID:FBgn0032439 Length:220 Species:Drosophila melanogaster


Alignment Length:177 Identity:41/177 - (23%)
Similarity:66/177 - (37%) Gaps:58/177 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLY 76
            :.|.||:..|.::.:.|||:|.|.|.|..:..|:||.....|.::||:.......:...:|::|.
  Fly    77 VMVCNLDYGVDDDDIMELFNQDGVVEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLD 141

Human    77 GRPIKIQFRSGSSHAPQDVSLSYPQHHVGNSSPTSTSPSSRYERTMDNMTSSAQIIQRSFSSPEN 141
            ||.:|:                   |.|.|:                                .|
  Fly   142 GRRLKL-------------------HLVQNT--------------------------------RN 155

Human   142 FQRQAVMNSALRQMSY------GGKFGSSPLDQSGFSPSVQSHSHSF 182
            |:|..|.:.:||..|:      .|.|.:..| |:||..|....:.||
  Fly   156 FKRTDVDDLSLRMGSFKTRFLQNGTFKTRSL-QNGFQKSRLFRNSSF 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM7NP_001272974.1 RRM_RBM7 9..83 CDD:410005 22/70 (31%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 25..35 4/9 (44%)
ZCCHC8 binding. /evidence=ECO:0000269|PubMed:27905398, ECO:0007744|PDB:5LXR, ECO:0007744|PDB:5LXY 59..76 1/16 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..267 7/20 (35%)
Ref2NP_609574.1 RRM_SF 75..149 CDD:473069 22/90 (24%)

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