DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42764 and Crispld2

DIOPT Version :9

Sequence 1:NP_001189140.1 Gene:CG42764 / 10178963 FlyBaseID:FBgn0261832 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001297564.1 Gene:Crispld2 / 78892 MGIID:1926142 Length:495 Species:Mus musculus


Alignment Length:219 Identity:45/219 - (20%)
Similarity:57/219 - (26%) Gaps:83/219 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YNVIRSEAY-DAHNDHRRTWVVPELIESDELSHDA---------------------EEYAIHLAT 58
            :|.:|.:.| .|.|....||       .:||...|                     :..|:|...
Mouse    63 HNKLRGQVYPPASNMEHMTW-------DEELERSAAAWAHRCLWEHGPAGLLRSIGQNLAVHWGR 120

  Fly    59 LNIPD---QILYETAKDRNIRVDHLDYP-----LSEPENDFYTENICEFIRNECVYYWASEGAAS 115
            ...|.   |..|:..||......|...|     .|.|....||:.:           ||:.....
Mouse   121 YRSPGFHVQSWYDEVKDYTYPYPHECTPRCRERCSGPMCTHYTQMV-----------WATTNKIG 174

  Fly   116 YGIAKERRTKVEQSLADKFSAITWKSTTEMGVGWAPKDRSKKGGRKILVVRYSPAGNQPGEYAEN 180
            ..:...|...|            |..|.|..|              .||..|||.||..||....
Mouse   175 CAVHTCRNMNV------------WGDTWENAV--------------YLVCNYSPKGNWIGEAPYK 213

  Fly   181 IGDTEFLEYFKMPTREDPDRWRNG 204
            .|         .|..|.|..:..|
Mouse   214 HG---------RPCSECPSSYGGG 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42764NP_001189140.1 SCP 22..172 CDD:294090 34/179 (19%)
Crispld2NP_001297564.1 CAP 56..201 CDD:381818 33/181 (18%)
LCCL 284..368 CDD:128866
LCCL 387..486 CDD:367672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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