DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42764 and r3hdml

DIOPT Version :9

Sequence 1:NP_001189140.1 Gene:CG42764 / 10178963 FlyBaseID:FBgn0261832 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001373427.1 Gene:r3hdml / 561976 ZFINID:ZDB-GENE-090313-275 Length:252 Species:Danio rerio


Alignment Length:178 Identity:36/178 - (20%)
Similarity:57/178 - (32%) Gaps:46/178 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YNVIRSEAY-DAHNDHRRTWVVPELIESDELSHDAEEYAIHLATLNIPDQILYETAKDRNI---- 75
            :|.:||:.: .|.|.....|       .:.|:..||.:|......:.|...|....::.:|    
Zfish    73 HNRVRSQVFPPAANMEYMVW-------DERLAKSAEFWASQCIWEHGPHHFLQHIGQNLSIISGR 130

  Fly    76 --RVDHLDYPLSEPENDFYTENICEFIRNECVYY----WASEGAASYGIAKERRTKVEQSLADKF 134
              .:..|.....:..:.|...:.|.  .:.|.:|    ||:.......|.|.....|..|:    
Zfish   131 YKSIIDLVKSWYDERHSFSYPSRCS--GSVCTHYTQMVWAASNKIGCAIKKCSDIFVFGSM---- 189

  Fly   135 SAITWKSTTEMGVGWAPKDRSKKGGRKILVVRYSPAGNQPGEYAENIG 182
                ||..|                  :||..|:..||..||....||
Zfish   190 ----WKQAT------------------LLVCNYAIKGNWVGEAPYKIG 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42764NP_001189140.1 SCP 22..172 CDD:294090 27/160 (17%)
r3hdmlNP_001373427.1 CAP_R3HDML 66..201 CDD:349409 29/162 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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