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Protein Alignment CG42764 and R3hdml
DIOPT Version :9
Sequence 1: | NP_001189140.1 |
Gene: | CG42764 / 10178963 |
FlyBaseID: | FBgn0261832 |
Length: | 232 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102432.1 |
Gene: | R3hdml / 366245 |
RGDID: | 1305296 |
Length: | 253 |
Species: | Rattus norvegicus |
Alignment Length: | 187 |
Identity: | 37/187 - (19%) |
Similarity: | 58/187 - (31%) |
Gaps: | 73/187 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 DAHNDHRRTWVVPE------LIESDELSHDAEEYAIHLATLNIPDQILYETAKDRNIR------- 76
|.|| |.|..|.|. ::..::|:..||.:|......:.|.|:.....::.::.
Rat 68 DYHN-HIRASVHPPASNMEYMVWDEQLARAAEAWATQCIWAHGPSQLTKYVGQNLSVHSGRYRSV 131
Fly 77 VD----------HLDYP------------LSEPENDFYTENICEFIRNECVYYWASEGAASYGIA 119
|| |..:| .|.|....||:.: ||| ::..|.|
Rat 132 VDLVKSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMV-----------WAS--SSRLGCA 183
Fly 120 KERRTKVEQSLADKFSAITWKSTTEMGVGWAPKDRSKKGGRKILVVRYSPAGNQPGE 176
....:.:. .|.||.:..| .||..|:..||..||
Rat 184 IHTCSSIN----------VWGSTWQQAV--------------YLVCNYAIKGNWIGE 216
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG42764 | NP_001189140.1 |
SCP |
22..172 |
CDD:294090 |
33/181 (18%) |
R3hdml | NP_001102432.1 |
SCP |
65..207 |
CDD:294090 |
32/176 (18%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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